RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 PNMA1Q8ND90 353 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 NKX2-3Q8TAU0 364 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 NUP88Q99567 741 aaPredicted RBP17.85■□□□□ 0.45
PFDN6-202ENST00000374607 HOXC10Q9NYD6 342 aa17.85■□□□□ 0.45
PFDN6-202ENST00000374607 TLR2O60603 784 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 COG2Q14746 738 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 CATIPQ7Z7H3 387 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 CCAR1Q8IX12 1150 aaKnown RBP17.84■□□□□ 0.45
PFDN6-202ENST00000374607 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
PFDN6-202ENST00000374607 DCAF4Q8WV16 495 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 KCNB2Q92953 911 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
PFDN6-202ENST00000374607 CPA4Q9UI42 421 aa17.84■□□□□ 0.45
PFDN6-202ENST00000374607 GCLCP48506 637 aaPredicted RBP17.83■□□□□ 0.44
PFDN6-202ENST00000374607 HERVK_113P62684 666 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 KIF22Q14807 665 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 TNS4Q8IZW8 715 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 CHURC1Q8WUH1 139 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 GMCL1Q96IK5 515 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 MTA3Q9BTC8 594 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 PAGR1Q9BTK6 254 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 CWC22Q9HCG8 908 aaKnown RBP17.83■□□□□ 0.44
PFDN6-202ENST00000374607 NAP1L2Q9ULW6 460 aaPredicted RBP17.83■□□□□ 0.44
PFDN6-202ENST00000374607 CYP46A1Q9Y6A2 500 aa17.83■□□□□ 0.44
PFDN6-202ENST00000374607 TMEM232C9JQI7 657 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 NOVP48745 357 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 ANTXR2P58335 489 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 NUP133Q8WUM0 1156 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 ANKS1AQ92625 1134 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 FEM1BQ9UK73 627 aa17.82■□□□□ 0.44
PFDN6-202ENST00000374607 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
PFDN6-202ENST00000374607 WDR19Q8NEZ3 1342 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 GPR25O00155 361 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 FKTNO75072 461 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 STAT2P52630 851 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 ANAPC15P60006 121 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 SP3Q02447 781 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 SEC23AQ15436 765 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 FAM160B2Q86V87 743 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 TCEANC2Q96MN5 208 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 CFHR5Q9BXR6 569 aa17.81■□□□□ 0.44
PFDN6-202ENST00000374607 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
PFDN6-202ENST00000374607 ZBED4O75132 1171 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
PFDN6-202ENST00000374607 PARP1P09874 1014 aaKnown RBP17.8■□□□□ 0.44
PFDN6-202ENST00000374607 PDHBP11177 359 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 CPA1P15085 419 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 DSG3P32926 999 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 PLS1Q14651 629 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 ARHGEF6Q15052 776 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
PFDN6-202ENST00000374607 RUFY3Q7L099 469 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 PRPF38AQ8NAV1 312 aaKnown RBP17.8■□□□□ 0.44
PFDN6-202ENST00000374607 C22orf23Q9BZE7 217 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 SLC12A7Q9Y666 1083 aa17.8■□□□□ 0.44
PFDN6-202ENST00000374607 SPDYE16A6NNV3 312 aaPredicted RBP17.79■□□□□ 0.44
PFDN6-202ENST00000374607 DHX16O60231 1041 aaKnown RBP17.79■□□□□ 0.44
PFDN6-202ENST00000374607 LIFRP42702 1097 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
PFDN6-202ENST00000374607 Q6ZUG5 572 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 MB21D1Q8N884 522 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 GPRC5AQ8NFJ5 357 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
PFDN6-202ENST00000374607 TM6SF1Q9BZW5 370 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 FBXO28Q9NVF7 368 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 PPP1R9AQ9ULJ8 1098 aa17.79■□□□□ 0.44
PFDN6-202ENST00000374607 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 CALM1P0DP23 149 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 CALM2P0DP24 149 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 CALM3P0DP25 149 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 KIF5BP33176 963 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 SLC4A3P48751 1232 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 CCNA1P78396 465 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 C17orf99Q6UX52 265 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 ZNF654Q8IZM8 581 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 ZNF296Q8WUU4 475 aaPredicted RBP17.78■□□□□ 0.44
PFDN6-202ENST00000374607 ATG4CQ96DT6 458 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
PFDN6-202ENST00000374607 ZSWIM6Q9HCJ5 1215 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
PFDN6-202ENST00000374607 PDRG1Q9NUG6 133 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
PFDN6-202ENST00000374607 DDAH1O94760 285 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms