RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 TMTC3Q6ZXV5 915 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 SMARCC2Q8TAQ2 1214 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 FEZ1Q99689 392 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 WDR18Q9BV38 432 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 UBA5Q9GZZ9 404 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 GPCPD1Q9NPB8 672 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 PASKQ96RG2 1323 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 hCG_1642624A0A1W2PR95 340 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 USP17L10C9JJH3 530 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 GJB2P29033 226 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 ZNF543Q08ER8 600 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 KIAA1683Q9H0B3 1180 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 VCPKMTQ9H867 229 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.41■□□□□ 0.86
C9orf43-202ENST00000374165 MYH6P13533 1939 aa20.41■□□□□ 0.86
C9orf43-202ENST00000374165 IRF6O14896 467 aa20.4■□□□□ 0.86
C9orf43-202ENST00000374165 DHX16O60231 1041 aaKnown RBP20.4■□□□□ 0.86
C9orf43-202ENST00000374165 MCM4P33991 863 aa20.4■□□□□ 0.86
C9orf43-202ENST00000374165 SLC16A2P36021 539 aa20.4■□□□□ 0.86
C9orf43-202ENST00000374165 SLC1A4P43007 532 aa20.4■□□□□ 0.86
C9orf43-202ENST00000374165 OTUD5Q96G74 571 aa20.4■□□□□ 0.86
C9orf43-202ENST00000374165 EMILIN3Q9NT22 766 aa20.4■□□□□ 0.86
C9orf43-202ENST00000374165 CCDC196A0A1B0GTZ2 297 aa20.39■□□□□ 0.86
C9orf43-202ENST00000374165 IFNAR1P17181 557 aa20.39■□□□□ 0.86
C9orf43-202ENST00000374165 KIF5BP33176 963 aa20.39■□□□□ 0.86
C9orf43-202ENST00000374165 BACE1P56817 501 aa20.39■□□□□ 0.86
C9orf43-202ENST00000374165 NUCB2P80303 420 aa20.39■□□□□ 0.86
C9orf43-202ENST00000374165 LLPHQ9BRT6 129 aaKnown RBP20.39■□□□□ 0.86
C9orf43-202ENST00000374165 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.86
C9orf43-202ENST00000374165 TOMM70O94826 608 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 PPP2R5BQ15173 497 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 C2orf69Q8N8R5 385 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 PIBF1Q8WXW3 757 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 GMCL1Q96IK5 515 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 AIFM3Q96NN9 605 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 GOPCQ9HD26 462 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 RBM28Q9NW13 759 aaKnown RBP20.39■□□□□ 0.85
C9orf43-202ENST00000374165 SYNPO2Q9UMS6 1093 aa20.39■□□□□ 0.85
C9orf43-202ENST00000374165 GJA5P36382 358 aa20.38■□□□□ 0.85
C9orf43-202ENST00000374165 HMGCS2P54868 508 aa20.38■□□□□ 0.85
C9orf43-202ENST00000374165 CCDC96Q2M329 555 aa20.38■□□□□ 0.85
C9orf43-202ENST00000374165 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
C9orf43-202ENST00000374165 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
C9orf43-202ENST00000374165 SLC26A6Q9BXS9 759 aa20.38■□□□□ 0.85
C9orf43-202ENST00000374165 SPDYE5A6NIY4 337 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 FKBP1BP68106 108 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 FAM83BQ5T0W9 1011 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 ERO1BQ86YB8 467 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 AS3MTQ9HBK9 375 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 GJB4Q9NTQ9 266 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
C9orf43-202ENST00000374165 V9GY48 417 aaPredicted RBP20.37■□□□□ 0.85
C9orf43-202ENST00000374165 CNTNAP5Q8WYK1 1306 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 PPATQ06203 517 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 ASPRV1Q53RT3 343 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 DCAF4Q8WV16 495 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 SH2D4AQ9H788 454 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 VAT1LQ9HCJ6 419 aa20.37■□□□□ 0.85
C9orf43-202ENST00000374165 BMP3P12645 472 aa20.36■□□□□ 0.85
C9orf43-202ENST00000374165 SLC10A4Q96EP9 437 aa20.36■□□□□ 0.85
C9orf43-202ENST00000374165 ORC3Q9UBD5 711 aaPredicted RBP20.36■□□□□ 0.85
C9orf43-202ENST00000374165 SMCHD1A6NHR9 2005 aa20.36■□□□□ 0.85
C9orf43-202ENST00000374165 FMNL1O95466 1100 aaPredicted RBP20.36■□□□□ 0.85
C9orf43-202ENST00000374165 VCAM1P19320 739 aa20.36■□□□□ 0.85
C9orf43-202ENST00000374165 GPATCH4Q5T3I0 446 aaKnown RBP20.36■□□□□ 0.85
C9orf43-202ENST00000374165 FBXO28Q9NVF7 368 aa20.36■□□□□ 0.85
C9orf43-202ENST00000374165 ZDHHC9Q9Y397 364 aa20.36■□□□□ 0.85
C9orf43-202ENST00000374165 TMEM232C9JQI7 657 aa20.35■□□□□ 0.85
C9orf43-202ENST00000374165 PKN1Q16512 942 aa20.35■□□□□ 0.85
C9orf43-202ENST00000374165 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
C9orf43-202ENST00000374165 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
C9orf43-202ENST00000374165 GBP4Q96PP9 640 aa20.35■□□□□ 0.85
C9orf43-202ENST00000374165 CDKL5O76039 1030 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 GNAQP50148 359 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 FOSBP53539 338 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 HUNKP57058 714 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 SSRP1Q08945 709 aaKnown RBP20.34■□□□□ 0.85
C9orf43-202ENST00000374165 SAPCD2Q86UD0 394 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 ADGRF4Q8IZF3 695 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 MKRN3Q13064 507 aaKnown RBP20.34■□□□□ 0.85
C9orf43-202ENST00000374165 CLEC17AQ6ZS10 378 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 LPAR1Q92633 364 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 RNF26Q9BY78 433 aaPredicted RBP20.34■□□□□ 0.85
C9orf43-202ENST00000374165 RIOX1Q9H6W3 641 aa20.34■□□□□ 0.85
C9orf43-202ENST00000374165 C19orf81C9J6K1 198 aa20.33■□□□□ 0.85
C9orf43-202ENST00000374165 SYT1P21579 422 aa20.33■□□□□ 0.85
C9orf43-202ENST00000374165 SNAP25P60880 206 aa20.33■□□□□ 0.85
C9orf43-202ENST00000374165 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
C9orf43-202ENST00000374165 SPZ1Q9BXG8 430 aa20.33■□□□□ 0.85
C9orf43-202ENST00000374165 JMJD4Q9H9V9 463 aa20.33■□□□□ 0.85
C9orf43-202ENST00000374165 PRPF3O43395 683 aaKnown RBP20.32■□□□□ 0.84
C9orf43-202ENST00000374165 USP14P54578 494 aa20.32■□□□□ 0.84
C9orf43-202ENST00000374165 PPIL2Q13356 520 aa20.32■□□□□ 0.84
C9orf43-202ENST00000374165 OTUD7BQ6GQQ9 843 aa20.32■□□□□ 0.84
C9orf43-202ENST00000374165 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
C9orf43-202ENST00000374165 PIGSQ96S52 555 aa20.32■□□□□ 0.84
C9orf43-202ENST00000374165 RLFQ13129 1914 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms