RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 GRM1Q13255 1194 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 CASP8Q14790 479 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 PROM2Q8N271 834 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 YEATS4O95619 227 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 CTCFLQ8NI51 663 aaPredicted RBP12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 NEDD4P46934 1319 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 SSBP05455 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 RXRAP19793 462 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 VSNL1P62760 191 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 LCORLQ8N3X6 602 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 CEP112Q8N8E3 955 aa12.62□□□□□ -0.39
RPRD1B-201ENST00000373433 DOT1LQ8TEK3 1739 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 ZBTB43O43298 467 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 KLRK1P26718 216 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 CORO7P57737 925 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 MECOMQ03112 1051 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 VEZTQ9HBM0 779 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 SPECC1LQ69YQ0 1117 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 INTS13Q9NVM9 706 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 POLR3EQ9NVU0 708 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 A0A0U1RQJ8 604 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 MYO1BO43795 1136 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 NIM1KQ8IY84 436 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 CDC23Q9UJX2 597 aa12.61□□□□□ -0.39
RPRD1B-201ENST00000373433 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 CMA1P23946 247 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 WTIPA6NIX2 430 aaPredicted RBP12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 WDR78Q5VTH9 848 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 GDAP1L1Q96MZ0 367 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 ATP6V0A2Q9Y487 856 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 NFE2L3Q9Y4A8 694 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 LIG3P49916 1009 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 MNAT1P51948 309 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 STRBPQ96SI9 672 aaKnown RBP12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
RPRD1B-201ENST00000373433 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 CTAGE15A4D2H0 777 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 BTDP43251 543 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 TCP10Q12799 353 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 KAT14Q9H8E8 782 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 KIF28PB7ZC32 967 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 RNF40O75150 1001 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 FGFR2P21802 821 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 PPARAQ07869 468 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 SPECC1Q5M775 1068 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 AXDND1Q5T1B0 1012 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 TXNRD3Q86VQ6 643 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 AFAP1L1Q8TED9 768 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 CTAGE9A4FU28 777 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 SRGNP10124 158 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 TADA2BQ86TJ2 420 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 HNRNPLLQ8WVV9 542 aaKnown RBP12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
RPRD1B-201ENST00000373433 C5P01031 1676 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 TM4SF1P30408 202 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 EFCAB13Q8IY85 973 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 ANGEL1Q9UNK9 670 aaKnown RBP12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 RAD17O75943 681 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 BRAPQ7Z569 592 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 CCDC91Q7Z6B0 441 aa12.58□□□□□ -0.4
RPRD1B-201ENST00000373433 PPFIBP1Q86W92 1011 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms