RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CYP2D7A0A087X1C5 515 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 EEF2P13639 858 aaKnown RBP15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 SHHQ15465 462 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 TRIM60Q495X7 471 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 RIOX2Q8IUF8 465 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 PHF24Q9UPV7 400 aa15.75■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZNF236Q9UL36 1845 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 VWA5AO00534 786 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 STAT3P40763 770 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 KCTD2Q14681 263 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 BADQ92934 168 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 FERMT2Q96AC1 680 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 MMP19Q99542 508 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 TINF2Q9BSI4 451 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 PRDM5Q9NQX1 630 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 PDLIM7Q9NR12 457 aa15.74■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZBED9Q6R2W3 1325 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 TRIM43BA6NCK2 446 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 PGK2P07205 417 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 RARBP10826 455 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 COPB2P35606 906 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 TLE2Q04725 743 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZNF792Q3KQV3 632 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 C9orf50Q5SZB4 431 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZNF697Q5TEC3 545 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZSCAN25Q6NSZ9 544 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 CTR9Q6PD62 1173 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 SH3RF1Q7Z6J0 888 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 MIER1Q8N108 512 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 TRIM43Q96BQ3 446 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 BCL11AQ9H165 835 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 XPNPEP3Q9NQH7 507 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 FBXO28Q9NVF7 368 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 COG6Q9Y2V7 657 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 SLC4A4Q9Y6R1 1079 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 FRMPD3Q5JV73 1810 aa15.73■□□□□ 0.11
TRAPPC3-201ENST00000373159 UNC80Q8N2C7 3258 aa15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 CHGBP05060 677 aa15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 SMAD3P84022 425 aaKnown RBP15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 RNF180Q86T96 592 aa15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 REPS2Q8NFH8 660 aa15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.115e-6■■■■■ 29.2
TRAPPC3-201ENST00000373159 PUS7LQ9H0K6 701 aaKnown RBP15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 SEMA6BQ9H3T3 888 aa15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZNF214Q9UL59 606 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC3-201ENST00000373159 NAV1Q8NEY1 1877 aa15.71■□□□□ 0.11
TRAPPC3-201ENST00000373159 ZNF865P0CJ78 1059 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC3-201ENST00000373159 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC3-201ENST00000373159 MSL3Q8N5Y2 521 aaKnown RBP15.71■□□□□ 0.11
TRAPPC3-201ENST00000373159 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC3-201ENST00000373159 COL25A1Q9BXS0 654 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC3-201ENST00000373159 A0A0G2JMZ2 1700 aa15.71■□□□□ 0.1
TRAPPC3-201ENST00000373159 PGK1P00558 417 aa15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 TSEN34Q9BSV6 310 aaKnown RBP15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 CNPY2Q9Y2B0 182 aa15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 ROBO3Q96MS0 1386 aa15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
TRAPPC3-201ENST00000373159 KIAA0355O15063 1070 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 CLTBP09497 229 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 AKR1A1P14550 325 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 ITGB8P26012 769 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 TOX2Q96NM4 488 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 TEX13BQ9BXU2 312 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
TRAPPC3-201ENST00000373159 TTC28Q96AY4 2481 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 A0A1W2PQ45 241 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 A0A1W2PQY0 241 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 F5H6K3 240 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 RAD21O60216 631 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 ADAMTS4O75173 837 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 RASA1P20936 1047 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 KLRC3Q07444 240 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 MAMDC4Q6UXC1 1216 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 PRPF38AQ8NAV1 312 aaKnown RBP15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 SLF1Q9BQI6 1058 aa15.68■□□□□ 0.1
TRAPPC3-201ENST00000373159 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 SNAI1O95863 264 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 ANKRD33Q7Z3H0 272 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 KLHDC9Q8NEP7 349 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 DDX11Q96FC9 970 aa15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 TTYH1Q9H313 450 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC3-201ENST00000373159 MKNK2Q9HBH9 465 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms