RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ORC4O43929 436 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 SLF2Q8IX21 1173 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 SMYD4Q8IYR2 804 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-205ENST00000372067 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
VEGFA-205ENST00000372067 MAPK8IP1Q9UQF2 711 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 VEGFAP15692 232 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-205ENST00000372067 PKN1Q16512 942 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 C12orf60Q5U649 245 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 CALML3P27482 149 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 GNAQP50148 359 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.34■□□□□ 0.69
VEGFA-205ENST00000372067 CDC25BP30305 580 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 BMP15O95972 392 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 GYS1P13807 737 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 KRT27Q7Z3Y8 459 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 BLIDQ8IZY5 108 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 HPSEQ9Y251 543 aa19.34■□□□□ 0.69
VEGFA-205ENST00000372067 CCDC150Q8NCX0 1101 aa19.33■□□□□ 0.69
VEGFA-205ENST00000372067 PHF20Q9BVI0 1012 aa19.33■□□□□ 0.69
VEGFA-205ENST00000372067 SPATA31A6Q5VVP1 1343 aa19.33■□□□□ 0.69
VEGFA-205ENST00000372067 INF2Q27J81 1249 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 RRAGBQ5VZM2 374 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 KLRF2D3W0D1 207 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 UBA7P41226 1012 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 RCAN1P53805 252 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 USP17L2Q6R6M4 530 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 FOXP4Q8IVH2 680 aaPredicted RBP19.33■□□□□ 0.68
VEGFA-205ENST00000372067 DPF2Q92785 391 aa19.33■□□□□ 0.68
VEGFA-205ENST00000372067 USP27XA6NNY8 438 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 PARP1P09874 1014 aaKnown RBP19.32■□□□□ 0.68
VEGFA-205ENST00000372067 SYCP1Q15431 976 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 CCDC96Q2M329 555 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.32■□□□□ 0.685e-7■■■□□ 15.2
VEGFA-205ENST00000372067 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.32■□□□□ 0.683e-16■□□□□ 9.2
VEGFA-205ENST00000372067 V9GYY5 206 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-205ENST00000372067 CNTNAP5Q8WYK1 1306 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 PLCG2P16885 1265 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 LETM2Q2VYF4 491 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 RASGRP2Q7LDG7 609 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 NCAPGQ9BPX3 1015 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 GPCPD1Q9NPB8 672 aa19.32■□□□□ 0.68
VEGFA-205ENST00000372067 FRMPD2Q68DX3 1309 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-205ENST00000372067 STAT6P42226 847 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 RASSF4Q9H2L5 321 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
VEGFA-205ENST00000372067 CDK8P49336 464 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 ICE2Q659A1 982 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 SYT10Q6XYQ8 523 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 LRRC47Q8N1G4 583 aaKnown RBP19.31■□□□□ 0.68
VEGFA-205ENST00000372067 BANK1Q8NDB2 785 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 TMEM47Q9BQJ4 181 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 PPEF1O14829 653 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-205ENST00000372067 BBOX1O75936 387 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 IQUBQ8NA54 791 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 CCDC148Q8NFR7 591 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 MXD3Q9BW11 206 aa19.31■□□□□ 0.68
VEGFA-205ENST00000372067 TMEM232C9JQI7 657 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 APBA3O96018 575 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 JAKMIP3Q5VZ66 844 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 DPP8Q6V1X1 898 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-205ENST00000372067 MLKLQ8NB16 471 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 MYCBPQ99417 103 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-205ENST00000372067 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-205ENST00000372067 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-205ENST00000372067 FILIP1LQ4L180 1135 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 SBK1Q52WX2 424 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 TUBE1Q9UJT0 475 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 PFKFB3Q16875 520 aaPredicted RBP19.3■□□□□ 0.68
VEGFA-205ENST00000372067 CCDC178Q5BJE1 867 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 DTHD1Q6ZMT9 781 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 TBC1D16Q8TBP0 767 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 UIMC1Q96RL1 719 aa19.3■□□□□ 0.68
VEGFA-205ENST00000372067 WNT7AO00755 349 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 IKBKBO14920 756 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 TCP10Q12799 353 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 PPFIBP1Q86W92 1011 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 DGKHQ86XP1 1220 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 C10orf67Q8IYJ2 551 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 SAMSN1Q9NSI8 373 aaKnown RBP19.29■□□□□ 0.68
VEGFA-205ENST00000372067 POLLQ9UGP5 575 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 BAZ2AQ9UIF9 1905 aaKnown RBP19.29■□□□□ 0.68
VEGFA-205ENST00000372067 ANKRD20A12PQ8NF67 263 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 NEK11Q8NG66 645 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 RRP36Q96EU6 259 aaKnown RBP19.29■□□□□ 0.68
VEGFA-205ENST00000372067 CTNND2Q9UQB3 1225 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 ADRA2BP18089 450 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 USP40Q9NVE5 1235 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
VEGFA-205ENST00000372067 COL4A1P02462 1669 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 KARSQ15046 597 aaKnown RBP19.28■□□□□ 0.68
VEGFA-205ENST00000372067 CLEC10AQ8IUN9 316 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 IMPACTQ9P2X3 320 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 NCAPHQ15003 741 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 FBXO38Q6PIJ6 1188 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 TBC1D22AQ8WUA7 517 aa19.28■□□□□ 0.68
VEGFA-205ENST00000372067 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms