RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 HOXC6P09630 235 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 CCNA1P78396 465 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 PPARAQ07869 468 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 FAM47AQ5JRC9 791 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 CEP95Q96GE4 821 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 NYAP2Q9P242 653 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 OGDHLQ9ULD0 1010 aa13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-202ENST00000370885 FRMPD3Q5JV73 1810 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 F5H6K3 240 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 VWA5AO00534 786 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 NDUFB10O96000 172 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 ADORA2AP29274 412 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 CYP2C19P33261 490 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 KLRC3Q07444 240 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 DPF3Q92784 378 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 MKL1Q969V6 931 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 ZNF214Q9UL59 606 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 PPP1R9AQ9ULJ8 1098 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
EXOSC1-202ENST00000370885 RAD21O60216 631 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 NMT2O60551 498 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 NUCB1Q02818 461 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 PLS1Q14651 629 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 SHCBP1Q8NEM2 672 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 NAPBQ9H115 298 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 IL17RBQ9NRM6 502 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 TRIOBPQ9H2D6 2365 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 PFASO15067 1338 aa13.1□□□□□ -0.31
EXOSC1-202ENST00000370885 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 TFAP4Q01664 338 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 ZNF444Q8N0Y2 327 aaPredicted RBP13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 NBPF3Q9H094 633 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
EXOSC1-202ENST00000370885 LAMA3Q16787 3333 aa13.08□□□□□ -0.31
EXOSC1-202ENST00000370885 FGAP02671 866 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 COL6A1P12109 1028 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 PDE4AP27815 886 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 AAMPQ13685 434 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 NACAP1Q9BZK3 213 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.32
EXOSC1-202ENST00000370885 SMCHD1A6NHR9 2005 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 STRNO43815 780 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 PGK2P07205 417 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 FGRP09769 529 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 HSPD1P10809 573 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 CYBAP13498 195 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 STAT3P40763 770 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 ALX1Q15699 326 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 DPP9Q86TI2 863 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 RIOX2Q8IUF8 465 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 ANKLE1Q8NAG6 615 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 SLF1Q9BQI6 1058 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 HTATIP2Q9BUP3 242 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 MROH8Q9H579 483 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
EXOSC1-202ENST00000370885 PLXNA1Q9UIW2 1896 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 TTLL1O95922 423 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 TSPY3P0CV98 308 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 TSPY8P0CW00 308 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 SDSP20132 328 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 NOVP48745 357 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms