RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MCCP23508 829 aa17.42■□□□□ 0.38
COL9A1-204ENST00000370496 SLC1A4P43007 532 aa17.42■□□□□ 0.38
COL9A1-204ENST00000370496 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
COL9A1-204ENST00000370496 COG2Q14746 738 aa17.42■□□□□ 0.38
COL9A1-204ENST00000370496 IFIT1BQ5T764 474 aaKnown RBP17.42■□□□□ 0.38
COL9A1-204ENST00000370496 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
COL9A1-204ENST00000370496 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
COL9A1-204ENST00000370496 MB21D2Q8IYB1 491 aaPredicted RBP17.42■□□□□ 0.38
COL9A1-204ENST00000370496 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
COL9A1-204ENST00000370496 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
COL9A1-204ENST00000370496 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
COL9A1-204ENST00000370496 KRT32Q14532 448 aa17.41■□□□□ 0.38
COL9A1-204ENST00000370496 RASGRP2Q7LDG7 609 aa17.41■□□□□ 0.38
COL9A1-204ENST00000370496 CHST3Q7LGC8 479 aa17.41■□□□□ 0.38
COL9A1-204ENST00000370496 SLF1Q9BQI6 1058 aa17.41■□□□□ 0.38
COL9A1-204ENST00000370496 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
COL9A1-204ENST00000370496 HOXC10Q9NYD6 342 aa17.41■□□□□ 0.38
COL9A1-204ENST00000370496 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
COL9A1-204ENST00000370496 MCM5P33992 734 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 HSPA4P34932 840 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 FCGRTP55899 365 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 ERVK-9P63128 1117 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 ERVK-24P63145 666 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 ARHGEF6Q15052 776 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 LBX2Q6XYB7 198 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 CTU1Q7Z7A3 348 aaKnown RBP17.4■□□□□ 0.38
COL9A1-204ENST00000370496 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 DCAF4Q8WV16 495 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 MORF4L1Q9UBU8 362 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 TRIM17Q9Y577 477 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 PRC1O43663 620 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 DSG3P32926 999 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 STAT2P52630 851 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 WTAPQ15007 396 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 CCAR1Q8IX12 1150 aaKnown RBP17.4■□□□□ 0.38
COL9A1-204ENST00000370496 MB21D1Q8N884 522 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 ARHGAP39Q9C0H5 1083 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
COL9A1-204ENST00000370496 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 FEM1BQ9UK73 627 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
COL9A1-204ENST00000370496 TMEM232C9JQI7 657 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 PEX10O60683 326 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.37
COL9A1-204ENST00000370496 ANTXR2P58335 489 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 CCNA1P78396 465 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 COL13A1Q5TAT6 717 aaPredicted RBP17.39■□□□□ 0.37
COL9A1-204ENST00000370496 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 RBPJLQ9UBG7 517 aa17.39■□□□□ 0.37
COL9A1-204ENST00000370496 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
COL9A1-204ENST00000370496 FRMPD2Q68DX3 1309 aaPredicted RBP17.38■□□□□ 0.37
COL9A1-204ENST00000370496 PLXNB2O15031 1838 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 TNPO2O14787 897 aaKnown RBP17.38■□□□□ 0.37
COL9A1-204ENST00000370496 PDHBP11177 359 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 PSMC4P43686 418 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 PLS1Q14651 629 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 SEC23AQ15436 765 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 OTOP1Q7RTM1 612 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 FAM160B2Q86V87 743 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 ANKS1AQ92625 1134 aa17.38■□□□□ 0.37
COL9A1-204ENST00000370496 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
COL9A1-204ENST00000370496 CNMDO75829 334 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 PRPF38AQ8NAV1 312 aaKnown RBP17.37■□□□□ 0.37
COL9A1-204ENST00000370496 CHURC1Q8WUH1 139 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 USP26Q9BXU7 913 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 SNX14Q9Y5W7 946 aa17.37■□□□□ 0.37
COL9A1-204ENST00000370496 VWA5AO00534 786 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 GNRH1P01148 92 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
COL9A1-204ENST00000370496 CAP1Q01518 475 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 ZNF543Q08ER8 600 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 POTEEQ6S8J3 1075 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 NFXL1Q6ZNB6 911 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 KCNB2Q92953 911 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 COA7Q96BR5 231 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 GPCPD1Q9NPB8 672 aa17.36■□□□□ 0.37
COL9A1-204ENST00000370496 SH2B2O14492 632 aaPredicted RBP17.35■□□□□ 0.37
COL9A1-204ENST00000370496 ZBED4O75132 1171 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 SNHG28P0DPA3 235 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 HOXD10P28358 340 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 CTGFP29279 349 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 MAPK4P31152 587 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 ASPRV1Q53RT3 343 aa17.35■□□□□ 0.37
COL9A1-204ENST00000370496 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
COL9A1-204ENST00000370496 CATIPQ7Z7H3 387 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms