RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.9
ABCA4-201ENST00000370225 ARPP19P56211 112 aa9.46□□□□□ -0.9
ABCA4-201ENST00000370225 CYP4A11Q02928 519 aa9.46□□□□□ -0.9
ABCA4-201ENST00000370225 SETDB1Q15047 1291 aa9.46□□□□□ -0.9
ABCA4-201ENST00000370225 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
ABCA4-201ENST00000370225 GPR101Q96P66 508 aaPredicted RBP9.46□□□□□ -0.9
ABCA4-201ENST00000370225 SERTAD1Q9UHV2 236 aa9.46□□□□□ -0.9
ABCA4-201ENST00000370225 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 ADORA1P30542 326 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 SFMBT2Q5VUG0 894 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 SECISBP2LQ93073 1101 aaKnown RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 KIF9Q9HAQ2 790 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 MRPL11Q9Y3B7 192 aaKnown RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PABPC4Q13310 644 aaKnown RBP eCLIP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 CCDC105Q8IYK2 499 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 U2AF1L4Q8WU68 220 aaKnown RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 SKA2Q8WVK7 121 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PANK4Q9NVE7 773 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 ADAMTS12P58397 1594 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 KLRF2D3W0D1 207 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 TNNC2P02585 160 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 NAPGQ99747 312 aaPredicted RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 SGSM2O43147 1006 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PPP1R2P41236 205 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PLA2G4DQ86XP0 818 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 PCDHA12Q9UN75 941 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 SAT1P21673 171 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 MTX1Q13505 466 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 INTS8Q75QN2 995 aaKnown RBP9.45□□□□□ -0.9
ABCA4-201ENST00000370225 CCDC127Q96BQ5 260 aa9.45□□□□□ -0.9
ABCA4-201ENST00000370225 STAM2O75886 525 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SLFN13Q68D06 897 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 CAPN12Q6ZSI9 719 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 CFAP57Q96MR6 1250 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 DYNC1I1O14576 645 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 DMP1Q13316 513 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 PGBD1Q96JS3 809 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ADPGKQ9BRR6 497 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SLC16A2P36021 539 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SATB1Q01826 763 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 KRT27Q7Z3Y8 459 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SMC5Q8IY18 1101 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 RPS6KC1Q96S38 1066 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SLF1Q9BQI6 1058 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 TEKT3Q9BXF9 490 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 PUS3Q9BZE2 481 aaKnown RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 A0A0D9SFI3 127 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SERPINB2P05120 415 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 NLRP12P59046 1061 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SNAP25P60880 206 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 KCTD2Q14681 263 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ADAT2Q7Z6V5 191 aaKnown RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 BLIDQ8IZY5 108 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 MGARPQ8TDB4 240 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 RSAD2Q8WXG1 361 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 PALD1Q9ULE6 856 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ABCC2Q92887 1545 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 PIK3CAP42336 1068 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 EVCP57679 992 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ATL3Q6DD88 541 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SEC31BQ9NQW1 1179 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 MAGED2Q9UNF1 606 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ACTN4O43707 911 aaKnown RBP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 PHKA1P46020 1223 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 KAZNQ674X7 775 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.9
ABCA4-201ENST00000370225 NME8Q8N427 588 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 VPS37BQ9H9H4 285 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 LRFN2Q9ULH4 789 aa9.44□□□□□ -0.9
ABCA4-201ENST00000370225 SLC4A1P02730 911 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 OSBPP22059 807 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 ZNF131P52739 623 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 DIXDC1Q155Q3 683 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 ZNF772Q68DY9 489 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-201ENST00000370225 FAM76AQ8TAV0 307 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 DISC1Q9NRI5 854 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 GOLGA6CA6NDK9 693 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 GOLGA6BA6NDN3 693 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 GOLGA6DP0CG33 693 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 PDE6AP16499 860 aa9.43□□□□□ -0.9
ABCA4-201ENST00000370225 SLC12A2P55011 1212 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms