RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TMEM265A0A087WTH1 108 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 TCRBV5S4A2TA0A5A2 114 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 RARBP10826 455 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 RLBP1P12271 317 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 FCER1AP12319 257 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 DNAJB2P25686 324 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 SLFNL1Q499Z3 407 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 TMEM179Q6ZVK1 233 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 AACSQ86V21 672 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 CRNKL1Q9BZJ0 848 aaKnown RBP18.67■□□□□ 0.58
SSR4-204ENST00000370087 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
SSR4-204ENST00000370087 SLC5A4Q9NY91 659 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
SSR4-204ENST00000370087 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
SSR4-204ENST00000370087 ADAMTS4O75173 837 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
SSR4-204ENST00000370087 RAG1P15918 1043 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 ICA1Q05084 483 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 FAAP100Q0VG06 881 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 ZNF792Q3KQV3 632 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 ZKSCAN2Q63HK3 967 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 MMP19Q99542 508 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 VCPKMTQ9H867 229 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 TMX2Q9Y320 296 aa18.66■□□□□ 0.58
SSR4-204ENST00000370087 MYH7P12883 1935 aa18.65■□□□□ 0.58
SSR4-204ENST00000370087 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
SSR4-204ENST00000370087 FPGSQ05932 587 aa18.65■□□□□ 0.58
SSR4-204ENST00000370087 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
SSR4-204ENST00000370087 TINF2Q9BSI4 451 aa18.65■□□□□ 0.58
SSR4-204ENST00000370087 ADAMTS5Q9UNA0 930 aa18.65■□□□□ 0.58
SSR4-204ENST00000370087 MCM3APO60318 1980 aa18.64■□□□□ 0.58
SSR4-204ENST00000370087 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
SSR4-204ENST00000370087 PRKAB2O43741 272 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 IRX5P78411 483 aaPredicted RBP18.64■□□□□ 0.57
SSR4-204ENST00000370087 CEP85Q6P2H3 762 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 RNF180Q86T96 592 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 REPS2Q8NFH8 660 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 ARMT1Q9H993 441 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 IL1RAPL2Q9NP60 686 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 TMEM39AQ9NV64 488 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 RAPGEFL1Q9UHV5 662 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 NRBP1Q9UHY1 535 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 SYNRGQ9UMZ2 1314 aa18.64■□□□□ 0.57
SSR4-204ENST00000370087 SLC25A27O95847 323 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 CHGBP05060 677 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 PBX2P40425 430 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 TJAP1Q5JTD0 557 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 TMED8Q6PL24 325 aaPredicted RBP18.63■□□□□ 0.57
SSR4-204ENST00000370087 ANKRD33Q7Z3H0 272 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 RIOX2Q8IUF8 465 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 SYMPKQ92797 1274 aaKnown RBP18.63■□□□□ 0.57
SSR4-204ENST00000370087 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.63■□□□□ 0.572e-8■□□□□ 8.3
SSR4-204ENST00000370087 ZNF576Q9H609 170 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 ARHGEF10LQ9HCE6 1279 aa18.63■□□□□ 0.57
SSR4-204ENST00000370087 CHD7Q9P2D1 2997 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 GRXCR1A8MXD5 290 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 GOLIM4O00461 696 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 AKR1A1P14550 325 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 ACLYP53396 1101 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 SWAP70Q9UH65 585 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
SSR4-204ENST00000370087 ZNF214Q9UL59 606 aaPredicted RBP18.62■□□□□ 0.57
SSR4-204ENST00000370087 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.61■□□□□ 0.57
SSR4-204ENST00000370087 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.61■□□□□ 0.57
SSR4-204ENST00000370087 VWA5AO00534 786 aa18.61■□□□□ 0.57
SSR4-204ENST00000370087 ADCY6O43306 1168 aa18.61■□□□□ 0.57
SSR4-204ENST00000370087 EEF2P13639 858 aaKnown RBP18.61■□□□□ 0.57
SSR4-204ENST00000370087 CCSAPQ6IQ19 270 aaPredicted RBP18.61■□□□□ 0.57
SSR4-204ENST00000370087 C16orf59Q7L2K0 433 aa18.61■□□□□ 0.57
SSR4-204ENST00000370087 KLHDC9Q8NEP7 349 aa18.61■□□□□ 0.57
SSR4-204ENST00000370087 TIFAQ96CG3 184 aa18.61■□□□□ 0.57
SSR4-204ENST00000370087 DNAJC2Q99543 621 aaKnown RBP18.61■□□□□ 0.57
SSR4-204ENST00000370087 DIS3Q9Y2L1 958 aaKnown RBP18.61■□□□□ 0.57
SSR4-204ENST00000370087 XIRP2A4UGR9 3374 aa18.61■□□□□ 0.57
SSR4-204ENST00000370087 TNFRSF10AO00220 468 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 MBD4O95243 580 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 COL9A1P20849 921 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 CDK8P49336 464 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 KCTD2Q14681 263 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 TTF1Q15361 905 aaPredicted RBP18.6■□□□□ 0.57
SSR4-204ENST00000370087 SH2D4AQ9H788 454 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 STARD7Q9NQZ5 370 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 PPP1R9AQ9ULJ8 1098 aa18.6■□□□□ 0.57
SSR4-204ENST00000370087 SNAI1O95863 264 aaPredicted RBP18.59■□□□□ 0.57
SSR4-204ENST00000370087 TIMP1P01033 207 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 STAT3P40763 770 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 KCNA10Q16322 511 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 PPM1EQ8WY54 764 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 TOX2Q96NM4 488 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 NUP88Q99567 741 aaPredicted RBP18.59■□□□□ 0.57
SSR4-204ENST00000370087 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
SSR4-204ENST00000370087 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.59■□□□□ 0.57
SSR4-204ENST00000370087 PBX4Q9BYU1 374 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 LRRC37A2A6NM11 1700 aa18.59■□□□□ 0.57
SSR4-204ENST00000370087 TMEM240Q5SV17 173 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 C12orf60Q5U649 245 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms