RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 MOCS3O95396 460 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 CUL4BQ13620 913 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 PTPAQ15257 358 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 CCDC121Q6ZUS5 278 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 COG1Q8WTW3 980 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 LRRC1Q9BTT6 524 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 LRWD1Q9UFC0 647 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 RGPD8O14715 1765 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 USP14P54578 494 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 GUCY2DQ02846 1103 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 PPP2R5AQ15172 486 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 PSD3Q9NYI0 1048 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 HPCAL4Q9UM19 191 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 AXIN2Q9Y2T1 843 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 MYBL2P10244 700 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 PRPF4BQ13523 1007 aaKnown RBP11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 BAIAP2L1Q9UHR4 511 aa11.65□□□□□ -0.54
PRPF38B-201ENST00000370021 NEDD4P46934 1319 aa11.65□□□□□ -0.55
PRPF38B-201ENST00000370021 PTPREP23469 700 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 KRT2P35908 639 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 PEX19P40855 299 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 EPS15P42566 896 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 ASIC1P78348 528 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 APBA1Q02410 837 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 SPAG1Q07617 926 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 IFFO1Q0D2I5 559 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 CEP85LQ5SZL2 805 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 ATG9AQ7Z3C6 839 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 CCDC172P0C7W6 258 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 PHKA1P46020 1223 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 KLK7P49862 253 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 NNTQ13423 1086 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 CPLX4Q7Z7G2 160 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 NKX2-3Q8TAU0 364 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 A0A1B0GTH6 734 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 MMP1P03956 469 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 ERCC5P28715 1186 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 CLNS1AP54105 237 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 KIF6Q6ZMV9 814 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 MICALCLQ6ZW33 695 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 CATIPQ7Z7H3 387 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 ARL8AQ96BM9 186 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 ALS2CR12Q96Q35 445 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 HAUS4Q9H6D7 363 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 NFU1Q9UMS0 254 aa11.64□□□□□ -0.55
PRPF38B-201ENST00000370021 PSMA7O14818 248 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 DEXIO95424 95 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 TUBBP07437 444 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 PARP1P09874 1014 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 PDIA6Q15084 440 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 IFIT1BQ5T764 474 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 NFRKBQ6P4R8 1299 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 UHMK1Q8TAS1 419 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 UBLCP1Q8WVY7 318 aaPredicted RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 EPB41L5Q9HCM4 733 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 RASGRP2Q7LDG7 609 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 FANCBQ8NB91 859 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 N4BP2L2Q92802 583 aaPredicted RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 CABS1Q96KC9 395 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 LACRTQ9GZZ8 138 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 HPSEQ9Y251 543 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 CCDC194A0A1B0GVG4 234 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 PDE6AP16499 860 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 MAGEA1P43355 309 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 B4GALNT4Q76KP1 1039 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 RRAGAQ7L523 313 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 ZNF654Q8IZM8 581 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 TAF4BQ92750 862 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 MS4A14Q96JA4 679 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 TACO1Q9BSH4 297 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 KCND1Q9NSA2 647 aa11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 FBXO2Q9UK22 296 aaPredicted RBP11.63□□□□□ -0.55
PRPF38B-201ENST00000370021 PP2D1A8MPX8 630 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 CYP7A1P22680 504 aa11.62□□□□□ -0.55
PRPF38B-201ENST00000370021 ITGA6P23229 1130 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms