RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 GSDMAQ96QA5 445 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 CTNND2Q9UQB3 1225 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 KDM3AQ9Y4C1 1321 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 LMO7Q8WWI1 1683 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 CYP2D7A0A087X1C5 515 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 RIOK3O14730 519 aaKnown RBP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 IKBKBO14920 756 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 WDHD1O75717 1129 aaPredicted RBP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 U2AF2P26368 475 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 NF2P35240 595 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 ICA1Q05084 483 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 INF2Q27J81 1249 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 BAG1Q99933 345 aaPredicted RBP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 PSTPIP2Q9H939 334 aa5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 CWC15Q9P013 229 aaKnown RBP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 SRPRBQ9Y5M8 271 aaKnown RBP5.97□□□□□ -1.45
SMNDC1-202ENST00000369603 ERLIN2O94905 339 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 FAM13AO94988 1023 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 FOSP01100 380 aaPredicted RBP5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 MYL1P05976 194 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 FGFR2P21802 821 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 ERCC5P28715 1186 aaPredicted RBP5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 CDC25BP30305 580 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 PAFAH1B1P43034 410 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 CDK8P49336 464 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 SBK1Q52WX2 424 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 ARL6IP4Q66PJ3 421 aaKnown RBP5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 CTR9Q6PD62 1173 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 FMNL3Q8IVF7 1028 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 FOXP4Q8IVH2 680 aaPredicted RBP5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 KRT222Q8N1A0 295 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 ENAHQ8N8S7 591 aaPredicted RBP5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 IQCDQ96DY2 449 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 CLIC6Q96NY7 704 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 PLIN2Q99541 437 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 SEPT11Q9NVA2 429 aaKnown RBP5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 PI4KBQ9UBF8 816 aa5.96□□□□□ -1.45
SMNDC1-202ENST00000369603 USP17L3A6NCW0 530 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 USP17L4A6NCW7 530 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 HOXA7P31268 230 aaPredicted RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 MATR3P43243 847 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 IFI16Q16666 785 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 ABCB5Q2M3G0 1257 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 MAP9Q49MG5 647 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC93Q567U6 631 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 SLFN13Q68D06 897 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 PRR5LQ6MZQ0 368 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 USP17L1Q7RTZ2 530 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 RTKN2Q8IZC4 609 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 LRRC47Q8N1G4 583 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 IGSF22Q8N9C0 903 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 ZNF579Q8NAF0 562 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 GPKOWQ92917 476 aaPredicted RBP eCLIP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 IL17RAQ96F46 866 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 SPAG5Q96R06 1193 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 NUP58Q9BVL2 599 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 PICK1Q9NRD5 415 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 CALCOCO1Q9P1Z2 691 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 ARHGAP6O43182 974 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 SLFN14P0C7P3 912 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 GOLGA8HP0CJ92 632 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 KRT13P13646 458 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 GCFC2P16383 781 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 ZFYVE27Q5T4F4 411 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 CSGALNACT2Q8N6G5 542 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 SYMPKQ92797 1274 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 XPO4Q9C0E2 1151 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 BCL2L12Q9HB09 334 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 BIN2Q9UBW5 565 aaPredicted RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 DNAI1Q9UI46 699 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 PCDHA5Q9Y5H7 936 aa5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 V9GYY5 206 aaPredicted RBP5.96□□□□□ -1.46
SMNDC1-202ENST00000369603 KRT86O43790 486 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 HSPA1LP34931 641 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 GPSM2P81274 684 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 NR5A1Q13285 461 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 FCHSD1Q86WN1 690 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 SLFN12Q8IYM2 578 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 NEK11Q8NG66 645 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 IGDCC4Q8TDY8 1250 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 DYNLL2Q96FJ2 89 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 AIFM3Q96NN9 605 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 NAA15Q9BXJ9 866 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 FTOQ9C0B1 505 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 MYO3BQ8WXR4 1341 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 TBC1D8BQ0IIM8 1120 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 PFKFB3Q16875 520 aaPredicted RBP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 SPECC1LQ69YQ0 1117 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 FBXO11Q86XK2 927 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC51Q96ER9 411 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 CCDC42Q96M95 316 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 AMNQ9BXJ7 453 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 MMRN2Q9H8L6 949 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 DBNDD1Q9H9R9 158 aa5.95□□□□□ -1.46
SMNDC1-202ENST00000369603 DNM3Q9UQ16 869 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms