RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
SEMA6C-204ENST00000368914 PSMD1Q99460 953 aa16.29■□□□□ 0.2
SEMA6C-204ENST00000368914 MYO3BQ8WXR4 1341 aa16.29■□□□□ 0.2
SEMA6C-204ENST00000368914 TXKP42681 527 aa16.29■□□□□ 0.2
SEMA6C-204ENST00000368914 SWAP70Q9UH65 585 aa16.29■□□□□ 0.2
SEMA6C-204ENST00000368914 NHSQ6T4R5 1651 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 NR1I2O75469 434 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 SALL1Q9NSC2 1324 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 DDAH1O94760 285 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 SYKP43405 635 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 TRPM4Q8TD43 1214 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 CUL5Q93034 780 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 CCDC34Q96HJ3 373 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 C15orf52Q6ZUT6 534 aaKnown RBP16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 CCDC12Q8WUD4 166 aaPredicted RBP16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
SEMA6C-204ENST00000368914 GADL1Q6ZQY3 521 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 BMP3P12645 472 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 SHMT1P34896 483 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 UBA7P41226 1012 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 RESTQ13127 1097 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 SEC23AQ15436 765 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 TMEM260Q9NX78 707 aa16.27■□□□□ 0.2
SEMA6C-204ENST00000368914 SPDYE3A6NKU9 549 aa16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 TXLNAP40222 546 aa16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 MOB2Q70IA6 237 aa16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 GLIS2Q9BZE0 524 aaPredicted RBP16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 GRPEL1Q9HAV7 217 aa16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 SPEF2Q9C093 1822 aa16.27■□□□□ 0.19
SEMA6C-204ENST00000368914 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CHMP2AO43633 222 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 TMEM179Q6ZVK1 233 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 MRPS27Q92552 414 aaKnown RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 RNF26Q9BY78 433 aaPredicted RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CSADQ9Y600 493 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CDK11BP21127 795 aaKnown RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CALML3P27482 149 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 BRAPQ7Z569 592 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 FAM217BQ9NTX9 383 aaPredicted RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 SAMM50Q9Y512 469 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 KRT18P05783 430 aaKnown RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 GNA11P29992 359 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 REXO1Q8N1G1 1221 aaKnown RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 AGBL3Q8NEM8 1001 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 FAM151AQ8WW52 585 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CCDC43Q96MW1 224 aaKnown RBP16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 PSTPIP2Q9H939 334 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
SEMA6C-204ENST00000368914 CCDC192P0DO97 292 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 IDEP14735 1019 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 RAD51AP2Q09MP3 1159 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 HMGCS2P54868 508 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 CEP131Q9UPN4 1083 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 PAPPAQ13219 1627 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 GAKO14976 1311 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 POLR2DO15514 142 aaKnown RBP16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 NDUFB10O96000 172 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 MMP1P03956 469 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 FAM163AQ96GL9 167 aaPredicted RBP16.25■□□□□ 0.19
SEMA6C-204ENST00000368914 ADGRF4Q8IZF3 695 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 GJA10Q969M2 543 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 MAPK8IP1Q9UQF2 711 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 ADCY7P51828 1080 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 PTGDRQ13258 359 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 DNAJC25Q9H1X3 360 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 PDHBP11177 359 aa16.24■□□□□ 0.19
SEMA6C-204ENST00000368914 MTMR2Q13614 643 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms