RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
PTPRK-203ENST00000368207 FAM207AQ9NSI2 230 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-203ENST00000368207 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 ACTN2P35609 894 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 FOXO4P98177 505 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-203ENST00000368207 USP17L2Q6R6M4 530 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 KCTD1Q719H9 257 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 RDH13Q8NBN7 331 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 LMAN1P49257 510 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 TRIM14Q14142 442 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 SCARF1Q14162 830 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 FAM170AA1A519 330 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 EXOC3O60645 756 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 SPECC1LQ69YQ0 1117 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 FAM107BQ9H098 131 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 NOP56O00567 594 aaKnown RBP13.72□□□□□ -0.21
PTPRK-203ENST00000368207 CDC25AP30304 524 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-203ENST00000368207 GPBP1Q86WP2 473 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPRK-203ENST00000368207 ARHGEF1Q92888 912 aaKnown RBP13.72□□□□□ -0.21
PTPRK-203ENST00000368207 PGBD1Q96JS3 809 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 SLF1Q9BQI6 1058 aa13.72□□□□□ -0.21
PTPRK-203ENST00000368207 A0A1W2PQ27 194 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 A0A1W2PQ64 194 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 A0A1W2PQD8 194 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 TESPA1A2RU30 521 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 ARHGAP6O43182 974 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 IFT74Q96LB3 600 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 CALUO43852 315 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 COBLO75128 1261 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 MYZAPP0CAP1 466 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 CYP2D6P10635 497 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 KRT5P13647 590 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 CYP4A11Q02928 519 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 LINC00301Q8NCQ3 95 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 CCDC17Q96LX7 622 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 DLC1Q96QB1 1528 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 PRPHP41219 470 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 LIFRP42702 1097 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 TERF1P54274 439 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 EVCP57679 992 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 IRX3P78415 501 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-203ENST00000368207 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 TMC4Q7Z404 712 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
PTPRK-203ENST00000368207 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.22
PTPRK-203ENST00000368207 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.22
PTPRK-203ENST00000368207 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.22
PTPRK-203ENST00000368207 GOLGA6L7A0A1B0GV03 622 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 RIOK3O14730 519 aaKnown RBP13.7□□□□□ -0.22
PTPRK-203ENST00000368207 HSF2BPO75031 334 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 DDX25Q9UHL0 483 aaKnown RBP13.7□□□□□ -0.22
PTPRK-203ENST00000368207 PTPRUQ92729 1446 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
PTPRK-203ENST00000368207 EAPPQ56P03 285 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-203ENST00000368207 IFT81Q8WYA0 676 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 PIGSQ96S52 555 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 PAGR1Q9BTK6 254 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 SORBS3O60504 671 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 CACNB3P54284 484 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 RESTQ13127 1097 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 CCDC50Q8IVM0 306 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 COA7Q96BR5 231 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 FLOT1O75955 427 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 TTLL1O95922 423 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 MMP1P03956 469 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 CHGBP05060 677 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 TNFAIP3P21580 790 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 MAGEA1P43355 309 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
PTPRK-203ENST00000368207 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 TMTC1Q8IUR5 882 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 CARD6Q9BX69 1037 aa13.7□□□□□ -0.22
PTPRK-203ENST00000368207 RBM6P78332 1123 aaKnown RBP13.69□□□□□ -0.22
PTPRK-203ENST00000368207 DPCR1Q3MIW9 517 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 PSMB7Q99436 277 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 ATP6V0A2Q9Y487 856 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms