RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 C2orf69Q8N8R5 385 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 TRIM55Q9BYV6 548 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 XAB2Q9HCS7 855 aaKnown RBP7.81□□□□□ -1.16
SPTA1-201ENST00000368147 EYA2O00167 538 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 GNPTABQ3T906 1256 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 MAP3K21Q5TCX8 1036 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 HAUS3Q68CZ6 603 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 DCLK2Q8N568 766 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 DACT1Q9NYF0 836 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 PAXBP1Q9Y5B6 917 aa7.81□□□□□ -1.16
SPTA1-201ENST00000368147 KDRP35968 1356 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 LOC102724428A0A0B4J2F2 783 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 BMP15O95972 392 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 SIK1P57059 783 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ZSCAN23Q3MJ62 389 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 CCDC42Q96M95 316 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 TRIM31Q9BZY9 425 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 PPME1Q9Y570 386 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 COPG1Q9Y678 874 aaKnown RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 GCC2Q8IWJ2 1684 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 SMCO2A6NFE2 343 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 LIN9Q5TKA1 542 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 CNKSR1Q969H4 720 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 SYNDIG1Q9H7V2 258 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 HELLSQ9NRZ9 838 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ANGEL1Q9UNK9 670 aaKnown RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 TMEM232C9JQI7 657 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 EXOC3O60645 756 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 POLR2MP0CAP2 368 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 CHRNDQ07001 517 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 INF2Q27J81 1249 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 PSMB7Q99436 277 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 CFAP74Q9C0B2 1584 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ATP2B4P23634 1241 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 DHX32Q7L7V1 743 aaKnown RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 CACTINQ8WUQ7 758 aaKnown RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 DDX21Q9NR30 783 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 DISC1Q9NRI5 854 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 PALD1Q9ULE6 856 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ZNF335Q9H4Z2 1342 aaPredicted RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ZFYVE16Q7Z3T8 1539 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 RHOXF2BP0C7M4 288 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ZSCAN20P17040 1043 aaPredicted RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 HSPA1LP34931 641 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 SLC16A2P36021 539 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 HERC4Q5GLZ8 1057 aaPredicted RBP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 ZNF569Q5MCW4 686 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 RHOXF2Q9BQY4 288 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 DIABLOQ9NR28 239 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 COBLO75128 1261 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 PIK3CAP42336 1068 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 GSDMDP57764 484 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 NEDD9Q14511 834 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 KCTD2Q14681 263 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 AOC3Q16853 763 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 KAZNQ674X7 775 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 SND1Q7KZF4 910 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPTA1-201ENST00000368147 LMBR1Q8WVP7 490 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 PCDHB13Q9Y5F0 798 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 STK24Q9Y6E0 443 aa7.8□□□□□ -1.16
SPTA1-201ENST00000368147 K7ENM7 598 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 LMNAP02545 664 aaKnown RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 SLMAPQ14BN4 828 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 R3HDM1Q15032 1099 aaKnown RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 KRT222Q8N1A0 295 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 ARFGAP3Q9NP61 516 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 SPATS2LQ9NUQ6 558 aaKnown RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 BIVM-ERCC5R4GMW8 1640 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 A0A1B0GW55 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 E9PMD0 336 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 SLC27A2O14975 620 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 CEP104O60308 925 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4L2P0CJ85 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4L3P0CJ86 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4L4P0CJ87 422 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4L5P0CJ88 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4L6P0CJ89 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4L7P0CJ90 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PSMD6Q15008 389 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PI4K2BQ8TCG2 481 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PSTPIP2Q9H939 334 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 DUX4Q9UBX2 424 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 FAN1Q9Y2M0 1017 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 USP19O94966 1318 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 ICA1Q05084 483 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 PLCB4Q15147 1175 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 ZNF467Q7Z7K2 595 aaPredicted RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 CHURC1Q8WUH1 139 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 CCDC68Q9H2F9 335 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 Q9H521 79 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 RAD50Q92878 1312 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 MAST1Q9Y2H9 1570 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 CTAGE15A4D2H0 777 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 USP17L12C9JPN9 530 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 USP17L21D6R901 530 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 NME8Q8N427 588 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 GIPC1O14908 333 aa7.79□□□□□ -1.16
SPTA1-201ENST00000368147 XPAP23025 273 aaPredicted RBP7.79□□□□□ -1.16
SPTA1-201ENST00000368147 LMNB2Q03252 620 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms