RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 GMCL1P1Q8NEA9 526 aa28.32■■■□□ 2.12
PFDN2-201ENST00000368010 NUP88Q99567 741 aaPredicted RBP28.32■■■□□ 2.12
PFDN2-201ENST00000368010 DSCC1Q9BVC3 393 aa28.32■■■□□ 2.12
PFDN2-201ENST00000368010 SPATC1LQ9H0A9 340 aa28.32■■■□□ 2.12
PFDN2-201ENST00000368010 PPP1R9AQ9ULJ8 1098 aa28.32■■■□□ 2.12
PFDN2-201ENST00000368010 STX8Q9UNK0 236 aa28.32■■■□□ 2.12
PFDN2-201ENST00000368010 EN2P19622 333 aaPredicted RBP28.31■■■□□ 2.12
PFDN2-201ENST00000368010 MOV10L1Q9BXT6 1211 aaKnown RBP28.31■■■□□ 2.12
PFDN2-201ENST00000368010 RNF41Q9H4P4 317 aaPredicted RBP28.31■■■□□ 2.12
PFDN2-201ENST00000368010 IVNS1ABPQ9Y6Y0 642 aa28.31■■■□□ 2.12
PFDN2-201ENST00000368010 RAD50Q92878 1312 aa28.31■■■□□ 2.12
PFDN2-201ENST00000368010 ZNF213O14771 459 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 HMGCRP04035 888 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 XRCC5P13010 732 aaKnown RBP28.3■■■□□ 2.12
PFDN2-201ENST00000368010 RGS2P41220 211 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 PLS1Q14651 629 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 MORN1Q5T089 497 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 AKNAD1Q5T1N1 836 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 MFSD6Q6ZSS7 791 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 SHCBP1Q8NEM2 672 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 RUFY2Q8WXA3 655 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 RNF208Q9H0X6 261 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 MYH4Q9Y623 1939 aa28.3■■■□□ 2.12
PFDN2-201ENST00000368010 PTPREP23469 700 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 SLFN13Q68D06 897 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 TBC1D10CQ8IV04 446 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 STAG1Q8WVM7 1258 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 USP6NLQ92738 828 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 SLF1Q9BQI6 1058 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 NBPF3Q9H094 633 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 IL17RBQ9NRM6 502 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 ADAMTS5Q9UNA0 930 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 PLXNB2O15031 1838 aa28.29■■■□□ 2.12
PFDN2-201ENST00000368010 PARP14Q460N5 1801 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 SLC15A5A6NIM6 579 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 NMT2O60551 498 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 MAP2K5Q13163 448 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 UNC93B1Q9H1C4 597 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 IL25Q9H293 177 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 KIAA0100Q14667 2235 aaKnown RBP28.28■■■□□ 2.12
PFDN2-201ENST00000368010 CENPFP49454 3210 aa28.28■■■□□ 2.12
PFDN2-201ENST00000368010 VWA5AO00534 786 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 GJB1P08034 283 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 ERCC3P19447 782 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 CHMLP26374 656 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 TMEM132BQ14DG7 1078 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 TRMT44Q8IYL2 757 aaKnown RBP28.27■■■□□ 2.12
PFDN2-201ENST00000368010 NKX2-3Q8TAU0 364 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 TRIB2Q92519 343 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 APBA2Q99767 749 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 MROH8Q9H579 483 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 CTNNA3Q9UI47 895 aa28.27■■■□□ 2.12
PFDN2-201ENST00000368010 ZKSCAN1P17029 563 aaPredicted RBP28.26■■■□□ 2.11
PFDN2-201ENST00000368010 GRB14Q14449 540 aa28.26■■■□□ 2.11
PFDN2-201ENST00000368010 IMMTQ16891 758 aaKnown RBP28.26■■■□□ 2.11
PFDN2-201ENST00000368010 NCAPG2Q86XI2 1143 aa28.26■■■□□ 2.11
PFDN2-201ENST00000368010 BMP3P12645 472 aa28.25■■■□□ 2.11
PFDN2-201ENST00000368010 NOVP48745 357 aa28.25■■■□□ 2.11
PFDN2-201ENST00000368010 PRPF38AQ8NAV1 312 aaKnown RBP28.25■■■□□ 2.11
PFDN2-201ENST00000368010 GMCL1Q96IK5 515 aa28.25■■■□□ 2.11
PFDN2-201ENST00000368010 TCP11L1Q9NUJ3 509 aa28.25■■■□□ 2.11
PFDN2-201ENST00000368010 FEM1BQ9UK73 627 aa28.25■■■□□ 2.11
PFDN2-201ENST00000368010 ISY1Q9ULR0 285 aaKnown RBP28.25■■■□□ 2.11
PFDN2-201ENST00000368010 STRNO43815 780 aa28.24■■■□□ 2.11
PFDN2-201ENST00000368010 SLC25A27O95847 323 aa28.24■■■□□ 2.11
PFDN2-201ENST00000368010 NT5C2P49902 561 aa28.24■■■□□ 2.11
PFDN2-201ENST00000368010 ESR2Q92731 530 aa28.24■■■□□ 2.11
PFDN2-201ENST00000368010 LAMA4Q16363 1823 aa28.24■■■□□ 2.11
PFDN2-201ENST00000368010 NEDD4P46934 1319 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 NEFLP07196 543 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 STAT3P40763 770 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 SLC1A4P43007 532 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 GJA8P48165 433 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 RIOX2Q8IUF8 465 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 REPS2Q8NFH8 660 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 KIFC2Q96AC6 838 aa28.23■■■□□ 2.11
PFDN2-201ENST00000368010 ZNF214Q9UL59 606 aaPredicted RBP28.23■■■□□ 2.11
PFDN2-201ENST00000368010 HOXC6P09630 235 aa28.22■■■□□ 2.11
PFDN2-201ENST00000368010 COPB2P35606 906 aa28.22■■■□□ 2.11
PFDN2-201ENST00000368010 TRIM32Q13049 653 aa28.22■■■□□ 2.11
PFDN2-201ENST00000368010 U2AF1L4Q8WU68 220 aaKnown RBP28.22■■■□□ 2.11
PFDN2-201ENST00000368010 CCDC136Q96JN2 1154 aa28.22■■■□□ 2.11
PFDN2-201ENST00000368010 CTDP1Q9Y5B0 961 aaPredicted RBP28.22■■■□□ 2.11
PFDN2-201ENST00000368010 ZBED4O75132 1171 aa28.21■■■□□ 2.11
PFDN2-201ENST00000368010 TOP1P11387 765 aaKnown RBP28.21■■■□□ 2.11
PFDN2-201ENST00000368010 MCCP23508 829 aa28.21■■■□□ 2.11
PFDN2-201ENST00000368010 ADORA2AP29274 412 aa28.21■■■□□ 2.11
PFDN2-201ENST00000368010 CCL14Q16627 93 aa28.21■■■□□ 2.11
PFDN2-201ENST00000368010 SHISA4Q96DD7 197 aa28.21■■■□□ 2.11
PFDN2-201ENST00000368010 TEX13BQ9BXU2 312 aa28.21■■■□□ 2.11
PFDN2-201ENST00000368010 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.21■■■□□ 2.11
PFDN2-201ENST00000368010 HMX1Q9NP08 348 aaPredicted RBP28.21■■■□□ 2.11
PFDN2-201ENST00000368010 PAK6Q9NQU5 681 aaPredicted RBP28.21■■■□□ 2.11
PFDN2-201ENST00000368010 RPTORQ8N122 1335 aa28.2■■■□□ 2.11
PFDN2-201ENST00000368010 TMEM232C9JQI7 657 aa28.2■■■□□ 2.1
PFDN2-201ENST00000368010 STAT2P52630 851 aa28.2■■■□□ 2.1
PFDN2-201ENST00000368010 DPP9Q86TI2 863 aa28.2■■■□□ 2.1
PFDN2-201ENST00000368010 FAM160B2Q86V87 743 aa28.2■■■□□ 2.1
PFDN2-201ENST00000368010 ABRAQ8N0Z2 381 aa28.2■■■□□ 2.1
PFDN2-201ENST00000368010 DEFB118Q96PH6 123 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms