RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 BBOF1Q8ND07 529 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 MORC4Q8TE76 937 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 NELFBQ8WX92 580 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 NUTM2BA6NNL0 878 aaPredicted RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 NUTM2EB1AL46 878 aaPredicted RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 CCDC96Q2M329 555 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 ZNF569Q5MCW4 686 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 CRACR2BQ8N4Y2 399 aaPredicted RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 RAB17Q9H0T7 212 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 MARCKSP29966 332 aaPredicted RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 NDUFA8P51970 172 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 HS2ST1Q7LGA3 356 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 KCNJ18B7U540 433 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 BIN1O00499 593 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 POLR2DO15514 142 aaKnown RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 OR52Z1P0C646 297 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 KCNJ12Q14500 433 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 APBB1IPQ7Z5R6 666 aaPredicted RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 RNF10Q8N5U6 811 aaKnown RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 CEP63Q96MT8 703 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 SLAIN2Q9P270 581 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 DDX41Q9UJV9 622 aaKnown RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 CTNND2Q9UQB3 1225 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 UBE4BO95155 1302 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 A0A1W2PQJ5 194 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 CETN3O15182 167 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 KLHL10Q6JEL2 608 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 SAR1BQ9Y6B6 198 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 KIF13AQ9H1H9 1805 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 M0R2C6 588 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 CCDC122Q5T0U0 273 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 HNRNPLLQ8WVV9 542 aaKnown RBP8.13□□□□□ -1.11
VTA1-202ENST00000367630 KIFAP3Q92845 792 aa8.13□□□□□ -1.11
VTA1-202ENST00000367630 EIF3CLB5ME19 914 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 ZBED6P86452 979 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 ITIH3Q06033 890 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 KRT26Q7Z3Y9 468 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 PBKQ96KB5 322 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 EIF3CQ99613 913 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 TDRD12Q587J7 1177 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 JADE2Q9NQC1 790 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 MYO3BQ8WXR4 1341 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 RPN1P04843 607 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 RFC4P35249 363 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 COPB1P53618 953 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 CDK17Q00537 523 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 PKP1Q13835 747 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 TRIM11Q96F44 468 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 STRBPQ96SI9 672 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 AP3B2Q13367 1082 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 CABP7Q86V35 215 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 CSGALNACT2Q8N6G5 542 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 C3orf20Q8ND61 904 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 XDHP47989 1333 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 IFFO1Q0D2I5 559 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 NEK8Q86SG6 692 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 ZNF589Q86UQ0 364 aaPredicted RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 LIMA1Q9UHB6 759 aaKnown RBP8.12□□□□□ -1.11
VTA1-202ENST00000367630 TNKSO95271 1327 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 LRP6O75581 1613 aa8.12□□□□□ -1.11
VTA1-202ENST00000367630 SNRPFP62306 86 aaKnown RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 IQCB1Q15051 598 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 ASIC2Q16515 512 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 UBL4BQ8N7F7 174 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 SPAG5Q96R06 1193 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 TIMM10P62072 90 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 MAATS1Q7Z4T9 603 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 SAMD3Q8N6K7 520 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 NEK9Q8TD19 979 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 FERMT1Q9BQL6 677 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 MAN1B1Q9UKM7 699 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 MUTP22033 750 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 IKQ13123 557 aaPredicted RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 CC2D2BQ6DHV5 1058 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 HEATR3Q7Z4Q2 680 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 WHAMMQ8TF30 809 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 ATP2A1O14983 1001 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 GPTP24298 496 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 EPHB4P54760 987 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 SNX16P57768 344 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 MAN2A1Q16706 1144 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 DNAJC21Q5F1R6 531 aaKnown RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 SERTAD1Q9UHV2 236 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 CCNE1P24864 410 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 DHX40Q8IX18 779 aaKnown RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 SYN2Q92777 582 aaPredicted RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 CNOT10Q9H9A5 744 aaKnown RBP8.11□□□□□ -1.11
VTA1-202ENST00000367630 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
VTA1-202ENST00000367630 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 PDE4DQ08499 809 aa8.11□□□□□ -1.11
VTA1-202ENST00000367630 KIAA0753Q2KHM9 967 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms