RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
H3F3A-201ENST00000366813 TFCP2L1Q9NZI6 479 aa10.61□□□□□ -0.71
H3F3A-201ENST00000366813 TNS2Q63HR2 1409 aa10.61□□□□□ -0.71
H3F3A-201ENST00000366813 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.6□□□□□ -0.71
H3F3A-201ENST00000366813 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
H3F3A-201ENST00000366813 ZNF157P51786 506 aaPredicted RBP10.6□□□□□ -0.71
H3F3A-201ENST00000366813 AP3B2Q13367 1082 aa10.6□□□□□ -0.71
H3F3A-201ENST00000366813 COL24A1Q17RW2 1714 aa10.6□□□□□ -0.71
H3F3A-201ENST00000366813 FAM170BA6NMN3 283 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 EXOC5O00471 708 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 AOC2O75106 756 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 GCP02774 474 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 CYP27A1Q02318 531 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
H3F3A-201ENST00000366813 CSRNP1Q96S65 589 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 FAM105AQ9NUU6 356 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 ANKRD30BQ9BXX2 1392 aa10.59□□□□□ -0.71
H3F3A-201ENST00000366813 TXKP42681 527 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 MAPK8P45983 427 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 ENOX2Q16206 610 aaKnown RBP10.58□□□□□ -0.71
H3F3A-201ENST00000366813 RPS26P11Q5JNZ5 115 aaPredicted RBP10.58□□□□□ -0.71
H3F3A-201ENST00000366813 BCL2L13Q9BXK5 485 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 SEMA6CQ9H3T2 930 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 C14orf93Q9H972 538 aaKnown RBP10.58□□□□□ -0.71
H3F3A-201ENST00000366813 ABCB6Q9NP58 842 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 NLRP2Q9NX02 1062 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 CD2APQ9Y5K6 639 aa10.58□□□□□ -0.71
H3F3A-201ENST00000366813 PIK3C2GO75747 1445 aa10.58□□□□□ -0.72
H3F3A-201ENST00000366813 EPS8L3Q8TE67 593 aaKnown RBP10.58□□□□□ -0.72
H3F3A-201ENST00000366813 ZC3H12CQ9C0D7 883 aaKnown RBP10.58□□□□□ -0.72
H3F3A-201ENST00000366813 ACSS3Q9H6R3 686 aa10.58□□□□□ -0.72
H3F3A-201ENST00000366813 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
H3F3A-201ENST00000366813 LRRC4CQ9HCJ2 640 aa10.58□□□□□ -0.72
H3F3A-201ENST00000366813 DAGLAQ9Y4D2 1042 aa10.58□□□□□ -0.72
H3F3A-201ENST00000366813 ARHGEF28Q8N1W1 1705 aaKnown RBP10.57□□□□□ -0.72
H3F3A-201ENST00000366813 RBM47A0AV96 593 aaKnown RBP10.57□□□□□ -0.72
H3F3A-201ENST00000366813 SLFN14P0C7P3 912 aa10.57□□□□□ -0.72
H3F3A-201ENST00000366813 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
H3F3A-201ENST00000366813 PRPF40BQ6NWY9 871 aaKnown RBP10.57□□□□□ -0.72
H3F3A-201ENST00000366813 DTHD1Q6ZMT9 781 aa10.57□□□□□ -0.72
H3F3A-201ENST00000366813 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
H3F3A-201ENST00000366813 USP19O94966 1318 aa10.57□□□□□ -0.72
H3F3A-201ENST00000366813 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
H3F3A-201ENST00000366813 AKAP12Q02952 1782 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 PNMA6FA0A0J9YX94 578 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 LIG1P18858 919 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 FSTL1Q12841 308 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 GRM2Q14416 872 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
H3F3A-201ENST00000366813 TP53INP2Q8IXH6 220 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 GIPC2Q8TF65 315 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 CCDC39Q9UFE4 941 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 USP6P35125 1406 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
H3F3A-201ENST00000366813 EIF3AQ14152 1382 aaKnown RBP10.55□□□□□ -0.72
H3F3A-201ENST00000366813 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
H3F3A-201ENST00000366813 LDHBP07195 334 aaKnown RBP10.55□□□□□ -0.72
H3F3A-201ENST00000366813 TAGLNQ01995 201 aaKnown RBP10.55□□□□□ -0.72
H3F3A-201ENST00000366813 FBXL18Q96ME1 805 aa10.55□□□□□ -0.72
H3F3A-201ENST00000366813 BSDC1Q9NW68 430 aaPredicted RBP10.55□□□□□ -0.72
H3F3A-201ENST00000366813 WDR17Q8IZU2 1322 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 FCGRTP55899 365 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 VSIG10LQ86VR7 867 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 GATA6Q92908 595 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 PIDD1Q9HB75 910 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 GOLGA2P5Q9HBQ8 144 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 PPP1R9AQ9ULJ8 1098 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
H3F3A-201ENST00000366813 ACEP12821 1306 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 SYNGAP1Q96PV0 1343 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 LOC105371045A0A1W2PR82 267 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
H3F3A-201ENST00000366813 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 ZNF765Q7L2R6 523 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 ABI1Q8IZP0 508 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 GSX1Q9H4S2 264 aaPredicted RBP10.53□□□□□ -0.72
H3F3A-201ENST00000366813 CCDC86Q9H6F5 360 aaKnown RBP10.53□□□□□ -0.72
H3F3A-201ENST00000366813 GPN3Q9UHW5 284 aaPredicted RBP10.53□□□□□ -0.72
H3F3A-201ENST00000366813 ADGRE2Q9UHX3 823 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
H3F3A-201ENST00000366813 PRPF40AO75400 957 aaKnown RBP10.52□□□□□ -0.73
H3F3A-201ENST00000366813 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
H3F3A-201ENST00000366813 ALG1LQ6GMV1 187 aa10.52□□□□□ -0.73
H3F3A-201ENST00000366813 TUBGCP6Q96RT7 1819 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 SPATA31E1Q6ZUB1 1445 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 QSER1Q2KHR3 1735 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 PRNPP04156 253 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 FGD1P98174 961 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 OGFOD3Q6PK18 319 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 GLIS3Q8NEA6 775 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 WDR89Q96FK6 387 aaPredicted RBP10.51□□□□□ -0.73
H3F3A-201ENST00000366813 ATXN3LQ9H3M9 355 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 TMEM39AQ9NV64 488 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 BTAF1O14981 1849 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 KAT6BQ8WYB5 2073 aa10.51□□□□□ -0.73
H3F3A-201ENST00000366813 GSTP1P09211 210 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms