RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 PPATQ06203 517 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 FSTL1Q12841 308 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 CUL4AQ13619 759 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 PHKBQ93100 1093 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 NID2Q14112 1375 aa12.56□□□□□ -0.4
SNX6-201ENST00000362031 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 RTN1Q16799 776 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 TREML2Q5T2D2 321 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
SNX6-201ENST00000362031 ZIC5Q96T25 663 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 KCNH4Q9UQ05 1017 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 TLL2Q9Y6L7 1015 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 TMEM88BA6NKF7 163 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 VCAM1P19320 739 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 SLC1A4P43007 532 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 PPIL2Q13356 520 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 SYNE3Q6ZMZ3 975 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 TMTC3Q6ZXV5 915 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 NSUN7Q8NE18 718 aaKnown RBP12.55□□□□□ -0.4
SNX6-201ENST00000362031 WNK4Q96J92 1243 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
SNX6-201ENST00000362031 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
SNX6-201ENST00000362031 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 SNAP25P60880 206 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 SPRYD7Q5W111 196 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 RASAL3Q86YV0 1011 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 AS3MTQ9HBK9 375 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 FAM155AB1AL88 458 aaPredicted RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 PARP1P09874 1014 aaKnown RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 BMP3P12645 472 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 CCDC96Q2M329 555 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
SNX6-201ENST00000362031 GOPCQ9HD26 462 aa12.54□□□□□ -0.4
SNX6-201ENST00000362031 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 PEX10O60683 326 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 CALM1P0DP23 149 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 CALM2P0DP24 149 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 CALM3P0DP25 149 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 TAL1P17542 331 aaPredicted RBP12.53□□□□□ -0.4
SNX6-201ENST00000362031 RCAN1P53805 252 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 SHISA4Q96DD7 197 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 AIFM3Q96NN9 605 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 PTPN18Q99952 460 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 VAT1LQ9HCJ6 419 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 GJB4Q9NTQ9 266 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
SNX6-201ENST00000362031 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
SNX6-201ENST00000362031 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 CXCL11O14625 94 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 IL27Q8NEV9 243 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 SMARCC2Q8TAQ2 1214 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 BRI3BPQ8WY22 251 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 C12orf42Q96LP6 360 aa12.52□□□□□ -0.4
SNX6-201ENST00000362031 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.4
SNX6-201ENST00000362031 RLFQ13129 1914 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 IFNAR1P17181 557 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 APLP1P51693 650 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 CYP4F22Q6NT55 531 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
SNX6-201ENST00000362031 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 IPO9Q96P70 1041 aaKnown RBP12.52□□□□□ -0.41
SNX6-201ENST00000362031 SH2D4AQ9H788 454 aa12.52□□□□□ -0.41
SNX6-201ENST00000362031 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.41
SNX6-201ENST00000362031 PPP1R11O60927 126 aaPredicted RBP12.51□□□□□ -0.41
SNX6-201ENST00000362031 USP14P54578 494 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 GRM1Q13255 1194 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 BECN1Q14457 450 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 PKN1Q16512 942 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 LPAR1Q92633 364 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 SLC26A6Q9BXS9 759 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 CENPFP49454 3210 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
SNX6-201ENST00000362031 CPLX1O14810 134 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
SNX6-201ENST00000362031 SLC10A3P09131 477 aa12.5□□□□□ -0.41
SNX6-201ENST00000362031 KIF5BP33176 963 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms