RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
CALD1-202ENST00000361901 TPM1P09493 284 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 LMOD1P29536 600 aaPredicted RBP10.38□□□□□ -0.75
CALD1-202ENST00000361901 UBA7P41226 1012 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 MMP14P50281 582 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 DLGAP5Q15398 846 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 PDGFDQ9GZP0 370 aaPredicted RBP10.38□□□□□ -0.75
CALD1-202ENST00000361901 ALDH8A1Q9H2A2 487 aaPredicted RBP10.38□□□□□ -0.75
CALD1-202ENST00000361901 CLSTN2Q9H4D0 955 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 CTAGE5O15320 804 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 CDC25AP30304 524 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 ZNF76P36508 570 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 RILPL1Q5EBL4 403 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 STAG2Q8N3U4 1231 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 TTLL6Q8N841 843 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 SERPINB13Q9UIV8 391 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 DOT1LQ8TEK3 1739 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 CLSTN1O94985 981 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 CLEC17AQ6ZS10 378 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
CALD1-202ENST00000361901 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
CALD1-202ENST00000361901 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 MRVI1Q9Y6F6 885 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 PFKFB1P16118 471 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 STX17P56962 302 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 CFAP100Q494V2 611 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 KCTD1Q719H9 257 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 MIGA2Q7L4E1 593 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 NIM1KQ8IY84 436 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 NEBLO76041 1014 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 IVLP07476 585 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 SLC1A4P43007 532 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 CRKP46108 304 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 USH1GQ495M9 461 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 C12orf60Q5U649 245 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 TICAM2Q86XR7 235 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 LINC00301Q8NCQ3 95 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 BIN2Q9UBW5 565 aaPredicted RBP10.37□□□□□ -0.75
CALD1-202ENST00000361901 ZNF215Q9UL58 517 aaPredicted RBP10.37□□□□□ -0.75
CALD1-202ENST00000361901 PCDHB6Q9Y5E3 794 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 SLU7O95391 586 aaKnown RBP10.37□□□□□ -0.75
CALD1-202ENST00000361901 SCG2P13521 617 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 CCDC178Q5BJE1 867 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 CALR3Q96L12 384 aaKnown RBP10.37□□□□□ -0.75
CALD1-202ENST00000361901 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
CALD1-202ENST00000361901 INF2Q27J81 1249 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 ADALQ6DHV7 355 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 PPM1EQ8WY54 764 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 TMEM47Q9BQJ4 181 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 CBX8Q9HC52 389 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
CALD1-202ENST00000361901 PNOCQ13519 176 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 TMC4Q7Z404 712 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 SGMS1Q86VZ5 419 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 SMARCE1Q969G3 411 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 CEP95Q96GE4 821 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
CALD1-202ENST00000361901 TULP2O00295 520 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 MMP1P03956 469 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 CALML3P27482 149 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 SNAP25P60880 206 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 R3HDM1Q15032 1099 aaKnown RBP10.36□□□□□ -0.75
CALD1-202ENST00000361901 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
CALD1-202ENST00000361901 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
CALD1-202ENST00000361901 RASGRP2Q7LDG7 609 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
CALD1-202ENST00000361901 CSRNP1Q96S65 589 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 C6orf50Q9HD87 102 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 MAPK8IP1Q9UQF2 711 aa10.36□□□□□ -0.75
CALD1-202ENST00000361901 YEATS4O95619 227 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 KRT18P05783 430 aaKnown RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 CYP2C19P33261 490 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 GBP6Q6ZN66 633 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 CCDC47Q96A33 483 aaKnown RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 COA7Q96BR5 231 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 RTEL1Q9NZ71 1219 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 ITGB4P16144 1822 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 SMCO2A6NFE2 343 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 IDEP14735 1019 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 ARHGAP29Q52LW3 1261 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 RNF26Q9BY78 433 aaPredicted RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 GOLPH3LQ9H4A5 285 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 KIF2AO00139 706 aaPredicted RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 CCNT1O60563 726 aaKnown RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 NFIAQ12857 509 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 FCHSD1Q86WN1 690 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 GRAMD1CQ8IYS0 662 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 SRBD1Q8N5C6 995 aaKnown RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 KIAA1524Q8TCG1 905 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
CALD1-202ENST00000361901 PIGSQ96S52 555 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 CENPHQ9H3R5 247 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
CALD1-202ENST00000361901 FLT1P17948 1338 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms