RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 CTR9Q6PD62 1173 aa20.9■□□□□ 0.94
COL9A1-203ENST00000360859 MAML3Q96JK9 1138 aa20.9■□□□□ 0.94
COL9A1-203ENST00000360859 KANSL2Q9H9L4 492 aa20.9■□□□□ 0.94
COL9A1-203ENST00000360859 FBXO28Q9NVF7 368 aa20.9■□□□□ 0.94
COL9A1-203ENST00000360859 STXBP5LQ9Y2K9 1186 aa20.9■□□□□ 0.94
COL9A1-203ENST00000360859 SLC25A27O95847 323 aa20.89■□□□□ 0.93
COL9A1-203ENST00000360859 SLC39A5Q6ZMH5 540 aa20.89■□□□□ 0.93
COL9A1-203ENST00000360859 PUS7LQ9H0K6 701 aaKnown RBP20.89■□□□□ 0.93
COL9A1-203ENST00000360859 PRKAG2Q9UGJ0 569 aa20.89■□□□□ 0.93
COL9A1-203ENST00000360859 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
COL9A1-203ENST00000360859 PARP14Q460N5 1801 aa20.88■□□□□ 0.93
COL9A1-203ENST00000360859 MYCNP04198 464 aaPredicted RBP20.88■□□□□ 0.93
COL9A1-203ENST00000360859 ZSCAN25Q6NSZ9 544 aa20.88■□□□□ 0.93
COL9A1-203ENST00000360859 LRRCC1Q9C099 1032 aa20.88■□□□□ 0.93
COL9A1-203ENST00000360859 SMARCA5O60264 1052 aaPredicted RBP20.87■□□□□ 0.93
COL9A1-203ENST00000360859 MMP19Q99542 508 aa20.87■□□□□ 0.93
COL9A1-203ENST00000360859 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL9A1-203ENST00000360859 GOPCQ9HD26 462 aa20.87■□□□□ 0.93
COL9A1-203ENST00000360859 RCAN3Q9UKA8 241 aa20.87■□□□□ 0.93
COL9A1-203ENST00000360859 VWA5AO00534 786 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 PGK2P07205 417 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 ADCYAP1R1P41586 468 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 SNX17Q15036 470 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 LRRC41Q15345 812 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 RIOX2Q8IUF8 465 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 STRBPQ96SI9 672 aaKnown RBP20.86■□□□□ 0.93
COL9A1-203ENST00000360859 ARPP21Q9UBL0 812 aaPredicted RBP20.86■□□□□ 0.93
COL9A1-203ENST00000360859 PPP1R9AQ9ULJ8 1098 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 MYH7P12883 1935 aa20.86■□□□□ 0.93
COL9A1-203ENST00000360859 POTEB2H3BUK9 544 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 RAD21O60216 631 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 STAT3P40763 770 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 TRIM60Q495X7 471 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 FAM83BQ5T0W9 1011 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 C20orf194Q5TEA3 1177 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 FERMT2Q96AC1 680 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 ECHDC1Q9NTX5 307 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 NRBP1Q9UHY1 535 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 ZNF214Q9UL59 606 aaPredicted RBP20.85■□□□□ 0.93
COL9A1-203ENST00000360859 LTBP2Q14767 1821 aa20.85■□□□□ 0.93
COL9A1-203ENST00000360859 COL11A1P12107 1806 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-203ENST00000360859 KCTD2Q14681 263 aa20.84■□□□□ 0.93
COL9A1-203ENST00000360859 FAM109BQ6ICB4 259 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-203ENST00000360859 REPS2Q8NFH8 660 aa20.84■□□□□ 0.93
COL9A1-203ENST00000360859 PRDM5Q9NQX1 630 aaPredicted RBP20.84■□□□□ 0.93
COL9A1-203ENST00000360859 ZNF792Q3KQV3 632 aa20.83■□□□□ 0.93
COL9A1-203ENST00000360859 SBK1Q52WX2 424 aa20.83■□□□□ 0.93
COL9A1-203ENST00000360859 TINF2Q9BSI4 451 aa20.83■□□□□ 0.93
COL9A1-203ENST00000360859 XPNPEP3Q9NQH7 507 aa20.83■□□□□ 0.93
COL9A1-203ENST00000360859 DIS3Q9Y2L1 958 aaKnown RBP20.83■□□□□ 0.93
COL9A1-203ENST00000360859 ZNFX1Q9P2E3 1918 aaKnown RBP20.82■□□□□ 0.92
COL9A1-203ENST00000360859 A0A0C4DFX4 3053 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 GSG1L2A8MUP6 293 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 RARBP10826 455 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 TAL1P17542 331 aaPredicted RBP20.82■□□□□ 0.92
COL9A1-203ENST00000360859 RASA1P20936 1047 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 COPB2P35606 906 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 STK11IPQ8N1F8 1099 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 NUP88Q99567 741 aaPredicted RBP20.82■□□□□ 0.92
COL9A1-203ENST00000360859 PDLIM7Q9NR12 457 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 PHF24Q9UPV7 400 aa20.82■□□□□ 0.92
COL9A1-203ENST00000360859 LAMA2P24043 3122 aaKnown RBP20.81■□□□□ 0.92
COL9A1-203ENST00000360859 SHHQ15465 462 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 GIMAP6Q6P9H5 292 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 KBTBD3Q8NAB2 608 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 BADQ92934 168 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 GUCD1Q96NT3 240 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 MKNK2Q9HBH9 465 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 NYAP2Q9P242 653 aa20.81■□□□□ 0.92
COL9A1-203ENST00000360859 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-203ENST00000360859 TRIM43BA6NCK2 446 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 MINDY4BA8MYZ0 360 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 F5H6K3 240 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 PGK1P00558 417 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 ZNF865P0CJ78 1059 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-203ENST00000360859 TLE2Q04725 743 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 KLRC3Q07444 240 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 C9orf50Q5SZB4 431 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 APPBP2Q92624 585 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 TRIM43Q96BQ3 446 aaPredicted RBP20.8■□□□□ 0.92
COL9A1-203ENST00000360859 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 ROBO3Q96MS0 1386 aa20.8■□□□□ 0.92
COL9A1-203ENST00000360859 NDUFB10O96000 172 aa20.79■□□□□ 0.92
COL9A1-203ENST00000360859 TSHZ3Q63HK5 1081 aa20.79■□□□□ 0.92
COL9A1-203ENST00000360859 RNF180Q86T96 592 aa20.79■□□□□ 0.92
COL9A1-203ENST00000360859 FAM161BQ96MY7 647 aa20.79■□□□□ 0.92
COL9A1-203ENST00000360859 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
COL9A1-203ENST00000360859 PLXNA1Q9UIW2 1896 aa20.78■□□□□ 0.92
COL9A1-203ENST00000360859 RNF113AO15541 343 aaKnown RBP20.78■□□□□ 0.92
COL9A1-203ENST00000360859 AKR1A1P14550 325 aa20.78■□□□□ 0.92
COL9A1-203ENST00000360859 SNRNP48Q6IEG0 339 aaKnown RBP20.78■□□□□ 0.92
COL9A1-203ENST00000360859 PRPF38AQ8NAV1 312 aaKnown RBP20.78■□□□□ 0.92
COL9A1-203ENST00000360859 LENG1Q96BZ8 264 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-203ENST00000360859 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
COL9A1-203ENST00000360859 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-203ENST00000360859 CNPY2Q9Y2B0 182 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms