RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DRC3Q9H069 523 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 ZNF449Q6P9G9 518 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 HELBQ8NG08 1087 aaPredicted RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 FAM71BQ8TC56 605 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 XPAP23025 273 aaPredicted RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 TPH2Q8IWU9 490 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 ZBTB40Q9NUA8 1239 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 ATP8B3O60423 1300 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 POLR2DO15514 142 aaKnown RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 MIER3Q7Z3K6 550 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 SLC27A2O14975 620 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 AMFRQ9UKV5 643 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 ABCC10Q5T3U5 1492 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 INPP1P49441 399 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 NLRP12P59046 1061 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 MTHFSDQ2M296 383 aaKnown RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 METTL13Q8N6R0 699 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 RILPQ96NA2 401 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 DONSONQ9NYP3 566 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 PRPSAP1Q14558 356 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 JADE1Q6IE81 842 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 TTLL7Q6ZT98 887 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 GSTA1P08263 222 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 GSTA2P09210 222 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 ASPHQ12797 758 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 CLSTN2Q9H4D0 955 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.63□□□□□ -0.716e-7■■■■■ 48.9
CUX1-203ENST00000360264 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 PPP2R5DQ14738 602 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 PSMD6Q15008 389 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 LARSQ9P2J5 1176 aaKnown RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 ARPP21Q9UBL0 812 aaPredicted RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
CUX1-203ENST00000360264 TXKP42681 527 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 SKA2Q8WVK7 121 aaPredicted RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 PIK3C2GO75747 1445 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 CCDC124Q96CT7 223 aaKnown RBP10.63□□□□□ -0.71
CUX1-203ENST00000360264 SLC12A6Q9UHW9 1150 aa10.63□□□□□ -0.71
CUX1-203ENST00000360264 CAPN9O14815 690 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 HEXIM1O94992 359 aaKnown RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 RFC1P35251 1148 aaPredicted RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 LPIN2Q92539 896 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 CEP104O60308 925 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 EFCAB13Q8IY85 973 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 RASSF4Q9H2L5 321 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 RIC8AQ9NPQ8 531 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 KRT15P19012 456 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 RNASELQ05823 741 aaKnown RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 WHAMMP3Q1A5X7 153 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 PLEKHM2Q8IWE5 1019 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 PRPF38AQ8NAV1 312 aaKnown RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 C8orf58Q8NAV2 365 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 TSC1Q92574 1164 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 XAGE2Q96GT9 111 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 ORC6Q9Y5N6 252 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 RNF40O75150 1001 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 DIXDC1Q155Q3 683 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 FAM160B1Q5W0V3 765 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 FAM178BQ8IXR5 827 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 EDC4Q6P2E9 1401 aaKnown RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 ERVV-2B6SEH9 535 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 DDAH1O94760 285 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 FANCCQ00597 558 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 LRGUKQ96M69 825 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 CCNA1P78396 465 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 CDKL2Q92772 493 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 ATP6V0A1Q93050 837 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 EFHD1Q9BUP0 239 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 BZW2Q9Y6E2 419 aaKnown RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 LMNB1P20700 586 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 OSBPP22059 807 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 SRRM1Q8IYB3 904 aaKnown RBP10.62□□□□□ -0.71
CUX1-203ENST00000360264 RPS6KC1Q96S38 1066 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 USTQ9Y2C2 406 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 CUEDC2Q9H467 287 aa10.62□□□□□ -0.71
CUX1-203ENST00000360264 PDE6CP51160 858 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 DDX27Q96GQ7 796 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 ARMT1Q9H993 441 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 VPS37BQ9H9H4 285 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 BTG4Q9NY30 223 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 DDX41Q9UJV9 622 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 MYO18AQ92614 2054 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 TNNC2P02585 160 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 AOC3Q16853 763 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 SLC8A2Q9UPR5 921 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 SBNO1A3KN83 1393 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 ZNF790Q6PG37 636 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 CTAGE3PQ8IX95 158 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 TTC25Q96NG3 672 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms