RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 PNMA6AP0CW24 399 aaPredicted RBP21.22■□□□□ 0.99
SNX11-201ENST00000359238 RBM5P52756 815 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNX11-201ENST00000359238 DALRD3Q5D0E6 543 aaKnown RBP21.22■□□□□ 0.99
SNX11-201ENST00000359238 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNX11-201ENST00000359238 RTEL1Q9NZ71 1219 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 CNTNAP5Q8WYK1 1306 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 RAD17O75943 681 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 TSPY3P0CV98 308 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 TSPY8P0CW00 308 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 CLCN6P51797 869 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 GSDMDP57764 484 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 ERCC6LQ2NKX8 1250 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 HHIPL2Q6UWX4 724 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 C16orf86Q6ZW13 317 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 TMTC3Q6ZXV5 915 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 ZNF396Q96N95 335 aaPredicted RBP21.22■□□□□ 0.99
SNX11-201ENST00000359238 CPVLQ9H3G5 476 aa21.22■□□□□ 0.99
SNX11-201ENST00000359238 MMP1P03956 469 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 PLA2G4AP47712 749 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 ME1P48163 572 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 STX1AQ16623 288 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 EARS2Q5JPH6 523 aaKnown RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 TEX35Q5T0J7 233 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 PLCD3Q8N3E9 789 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 DEXIO95424 95 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 TUBB4AP04350 444 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 MARCKSP29966 332 aaPredicted RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 PTGER2P43116 358 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 TOB1P50616 345 aaPredicted RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 RCAN1P53805 252 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 SNW1Q13573 536 aaKnown RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 GRIPAP1Q4V328 841 aa21.21■□□□□ 0.99
SNX11-201ENST00000359238 C11orf57Q6ZUT1 292 aaPredicted RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 CCAR1Q8IX12 1150 aaKnown RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 DIS3L2Q8IYB7 885 aaKnown RBP21.21■□□□□ 0.99
SNX11-201ENST00000359238 A0A087WWV3 80 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 CTAGE5O15320 804 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 SF3A1Q15459 793 aaKnown RBP21.2■□□□□ 0.98
SNX11-201ENST00000359238 BRAPQ7Z569 592 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 FILIP1Q7Z7B0 1213 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 TRIM22Q8IYM9 498 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 ERCC4Q92889 916 aaPredicted RBP21.2■□□□□ 0.98
SNX11-201ENST00000359238 TRIM34Q9BYJ4 488 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 STX8Q9UNK0 236 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 FKBP1AP62942 108 aaKnown RBP21.2■□□□□ 0.98
SNX11-201ENST00000359238 RAD51AP2Q09MP3 1159 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 SHROOM1Q2M3G4 852 aaPredicted RBP21.2■□□□□ 0.98
SNX11-201ENST00000359238 ZNF444Q8N0Y2 327 aaPredicted RBP21.2■□□□□ 0.98
SNX11-201ENST00000359238 PNMA1Q8ND90 353 aa21.2■□□□□ 0.98
SNX11-201ENST00000359238 SIPA1L1O43166 1804 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 MYH8P13535 1937 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 CCDC196A0A1B0GTZ2 297 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 DDAH1O94760 285 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 ZRANB2O95218 330 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNX11-201ENST00000359238 TPM4P67936 248 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 MUM1L1Q5H9M0 696 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 ANO1Q5XXA6 986 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 TXLNBQ8N3L3 684 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 MAP3K14Q99558 947 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 TMEM47Q9BQJ4 181 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 RNF26Q9BY78 433 aaPredicted RBP21.19■□□□□ 0.98
SNX11-201ENST00000359238 POLR3EQ9NVU0 708 aa21.19■□□□□ 0.98
SNX11-201ENST00000359238 A0A1B0GVL5 298 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 FAM196BA6NMK8 535 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 WNT7AO00755 349 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 GOLGA8HP0CJ92 632 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 ZDHHC15Q96MV8 337 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 OSBPL5Q9H0X9 879 aaPredicted RBP21.18■□□□□ 0.98
SNX11-201ENST00000359238 BCS1LQ9Y276 419 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 NPY5RQ15761 445 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 ENGASEQ8NFI3 743 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 IMPACTQ9P2X3 320 aa21.18■□□□□ 0.98
SNX11-201ENST00000359238 BECN2A8MW95 431 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 PSMD14O00487 310 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 TCP10Q12799 353 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 TRIM29Q14134 588 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 STK38Q15208 465 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 PTPAQ15257 358 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 CEP95Q96GE4 821 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 KAT14Q9H8E8 782 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 ARGLU1Q9NWB6 273 aaPredicted RBP21.17■□□□□ 0.98
SNX11-201ENST00000359238 ZBTB12Q9Y330 459 aaPredicted RBP21.17■□□□□ 0.98
SNX11-201ENST00000359238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.17■□□□□ 0.98
SNX11-201ENST00000359238 SPTLC2O15270 562 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 KCNJ6P48051 423 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 GABPAQ06546 454 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 GNL2Q13823 731 aaKnown RBP21.17■□□□□ 0.98
SNX11-201ENST00000359238 AXDND1Q5T1B0 1012 aaPredicted RBP21.17■□□□□ 0.98
SNX11-201ENST00000359238 DHX40Q8IX18 779 aaKnown RBP21.17■□□□□ 0.98
SNX11-201ENST00000359238 MAD2L2Q9UI95 211 aa21.17■□□□□ 0.98
SNX11-201ENST00000359238 PRPF3O43395 683 aaKnown RBP21.16■□□□□ 0.98
SNX11-201ENST00000359238 CYTH3O43739 400 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 ARHGAP29Q52LW3 1261 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 DGKHQ86XP1 1220 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 NOSTRINQ8IVI9 506 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 FSIP1Q8NA03 581 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 NLGN2Q8NFZ4 835 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 ATP8B1O43520 1251 aa21.16■□□□□ 0.98
SNX11-201ENST00000359238 EIF6P56537 245 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms