RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 ATP2C1P98194 919 aaPredicted RBP17.01■□□□□ 0.31
GABPB1-202ENST00000359031 MDM2Q00987 491 aaPredicted RBP17.01■□□□□ 0.31
GABPB1-202ENST00000359031 NCAPHQ15003 741 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 NT5DC1Q5TFE4 455 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 DAGLBQ8NCG7 672 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 PYCARDQ9ULZ3 195 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 ZNF646O15015 1829 aaPredicted RBP17.01■□□□□ 0.31
GABPB1-202ENST00000359031 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
GABPB1-202ENST00000359031 BLIDQ8IZY5 108 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 STAG2Q8N3U4 1231 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 SERTAD1Q9UHV2 236 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 PCDHA4Q9UN74 947 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 PCDHA5Q9Y5H7 936 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
GABPB1-202ENST00000359031 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
GABPB1-202ENST00000359031 MYL5Q02045 173 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 PYM1Q9BRP8 204 aaKnown RBP16.99■□□□□ 0.31
GABPB1-202ENST00000359031 DACH1Q9UI36 760 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 GREB1LQ9C091 1923 aaPredicted RBP16.99■□□□□ 0.31
GABPB1-202ENST00000359031 SMARCA1P28370 1054 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 PIK3AP1Q6ZUJ8 805 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 SMARCE1Q969G3 411 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 IMPACTQ9P2X3 320 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
GABPB1-202ENST00000359031 TOMM70O94826 608 aa16.98■□□□□ 0.31
GABPB1-202ENST00000359031 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
GABPB1-202ENST00000359031 SARSP49591 514 aaKnown RBP16.98■□□□□ 0.31
GABPB1-202ENST00000359031 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
GABPB1-202ENST00000359031 ZNF174Q15697 407 aa16.98■□□□□ 0.31
GABPB1-202ENST00000359031 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
GABPB1-202ENST00000359031 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
GABPB1-202ENST00000359031 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
GABPB1-202ENST00000359031 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
GABPB1-202ENST00000359031 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
GABPB1-202ENST00000359031 TTF2Q9UNY4 1162 aaKnown RBP16.98■□□□□ 0.31
GABPB1-202ENST00000359031 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
GABPB1-202ENST00000359031 STXBP3O00186 592 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 WNT7AO00755 349 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 SMC2O95347 1197 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 GSDMDP57764 484 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 GABPAQ06546 454 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 PTGDRQ13258 359 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
GABPB1-202ENST00000359031 WWC2Q6AWC2 1192 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 STYK1Q6J9G0 422 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 FOXP4Q8IVH2 680 aaPredicted RBP16.97■□□□□ 0.31
GABPB1-202ENST00000359031 MLKLQ8NB16 471 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 CCDC12Q8WUD4 166 aaPredicted RBP16.97■□□□□ 0.31
GABPB1-202ENST00000359031 SYMPKQ92797 1274 aaKnown RBP16.97■□□□□ 0.31
GABPB1-202ENST00000359031 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
GABPB1-202ENST00000359031 SWAP70Q9UH65 585 aa16.97■□□□□ 0.31
GABPB1-202ENST00000359031 BAZ2BQ9UIF8 2168 aaKnown RBP16.97■□□□□ 0.31
GABPB1-202ENST00000359031 KLRF2D3W0D1 207 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 G3V3G9 751 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 M0R2N6 131 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 FOXN1O15353 648 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 CYTH3O43739 400 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 SLFN14P0C7P3 912 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 PRR29P0C7W0 189 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
GABPB1-202ENST00000359031 MORC3Q14149 939 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 SLC35G1Q2M3R5 365 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 ARHGAP27Q6ZUM4 889 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 USP49Q70CQ1 688 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 SPATA20Q8TB22 786 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 CEP95Q96GE4 821 aa16.96■□□□□ 0.31
GABPB1-202ENST00000359031 OSBPL5Q9H0X9 879 aaPredicted RBP16.96■□□□□ 0.31
GABPB1-202ENST00000359031 CBFA2T2O43439 604 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.3
GABPB1-202ENST00000359031 CT47A1Q5JQC4 288 aaPredicted RBP16.96■□□□□ 0.3
GABPB1-202ENST00000359031 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.3
GABPB1-202ENST00000359031 ISM2Q6H9L7 571 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 HEATR3Q7Z4Q2 680 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 PODNQ7Z5L7 613 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 C17orf53Q8N3J3 647 aaPredicted RBP16.96■□□□□ 0.3
GABPB1-202ENST00000359031 CACTINQ8WUQ7 758 aaKnown RBP16.96■□□□□ 0.3
GABPB1-202ENST00000359031 TEKT1Q969V4 418 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 DHX58Q96C10 678 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 IFNKQ9P0W0 207 aa16.96■□□□□ 0.3
GABPB1-202ENST00000359031 CCDC194A0A1B0GVG4 234 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 VWA3AA6NCI4 1184 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 F8W031 263 aaPredicted RBP16.95■□□□□ 0.3
GABPB1-202ENST00000359031 FANCCQ00597 558 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 LRMPQ12912 555 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 PICALMQ13492 652 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 DOK7Q18PE1 504 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 TYW1BQ6NUM6 668 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 SH3RF1Q7Z6J0 888 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 LRRC8AQ8IWT6 810 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 PDILTQ8N807 584 aa16.95■□□□□ 0.3
GABPB1-202ENST00000359031 EPSTI1Q96J88 318 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms