RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RNF219Q5W0B1 726 aaPredicted RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 TTBK2Q6IQ55 1244 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 ATG3Q9NT62 314 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 ORC6Q9Y5N6 252 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 RTL9Q8NET4 1388 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 IRS4O14654 1257 aaPredicted RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 SERPINB6P35237 376 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 FAM89AQ96GI7 184 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 BICC1Q9H694 974 aaKnown RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 KLF15Q9UIH9 416 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 GRM8O00222 908 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 N4BP1O75113 896 aaKnown RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 WBP4O75554 376 aaKnown RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 ATF7P17544 494 aaPredicted RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 SEMA3FQ13275 785 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 LMNTD2Q8IXW0 634 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 SLC17A8Q8NDX2 589 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 POLR3EQ9NVU0 708 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 RBM8AQ9Y5S9 174 aaKnown RBP10.74□□□□□ -0.69
CHD3-202ENST00000358181 MAD1L1Q9Y6D9 718 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 CCDC171Q6TFL3 1326 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 PPIP5K2O43314 1243 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 PLCG2P16885 1265 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 APOBRQ0VD83 1088 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 DCAF4L1Q3SXM0 396 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 ELMOD1Q8N336 334 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 VMP1Q96GC9 406 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 PCDHB15Q9Y5E8 787 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 PPFIA4O75335 1185 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 ARL4DP49703 201 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 VSIG1Q86XK7 387 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 LMTK3Q96Q04 1460 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 DISC1Q9NRI5 854 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 PDE4DQ08499 809 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 LGSNQ5TDP6 509 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 DENND2CQ68D51 928 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 SNX19Q92543 992 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 SCAF11Q99590 1463 aaKnown RBP10.73□□□□□ -0.69
CHD3-202ENST00000358181 H3BRJ5 948 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 ZNF165P49910 485 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 RAB44Q7Z6P3 723 aaPredicted RBP10.73□□□□□ -0.69
CHD3-202ENST00000358181 METTL23Q86XA0 190 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 TRIM59Q8IWR1 403 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 DOLKQ9UPQ8 538 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 TAF5LO75529 589 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 IL2RBP14784 551 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 FBXW10Q5XX13 1052 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 PHACTR3Q96KR7 559 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 TTC25Q96NG3 672 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 ZFYVE1Q9HBF4 777 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 GNA11P29992 359 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 KDRP35968 1356 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 TSGA10Q9BZW7 698 aa10.73□□□□□ -0.69
CHD3-202ENST00000358181 DDX19AQ9NUU7 478 aaKnown RBP10.73□□□□□ -0.69
CHD3-202ENST00000358181 CDV3Q9UKY7 258 aaKnown RBP10.73□□□□□ -0.69
CHD3-202ENST00000358181 H0YC42 278 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 TNNC2P02585 160 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 HADHAP40939 763 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 KDM5BQ9UGL1 1544 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 IFNB1P01574 187 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 TRMT10CQ7L0Y3 403 aaKnown RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 YAF2Q8IY57 180 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 CCNL1Q9UK58 526 aaPredicted RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 TLR3O15455 904 aaKnown RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 ZSCAN20P17040 1043 aaPredicted RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 CCPG1Q9ULG6 757 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 ARFGAP3Q9NP61 516 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 ZNF263O14978 683 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 PRPF4O43172 522 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHD3-202ENST00000358181 MYL3P08590 195 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 KHDRBS2Q5VWX1 349 aaKnown RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 PIK3AP1Q6ZUJ8 805 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 PAG1Q9NWQ8 432 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 GEMIN8Q9NWZ8 242 aaKnown RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 TPX2Q9ULW0 747 aaKnown RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 NDUFB5O43674 189 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 EXOC3O60645 756 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 NPM3O75607 178 aaKnown RBP10.72□□□□□ -0.69
CHD3-202ENST00000358181 CYP2J2P51589 502 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 VPS16Q9H269 839 aa10.72□□□□□ -0.69
CHD3-202ENST00000358181 TRIM75PA6NK02 468 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 TTC4O95801 387 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 ALAS1P13196 640 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 YWHAHQ04917 246 aaPredicted RBP10.71□□□□□ -0.69
CHD3-202ENST00000358181 ELMSAN1Q6PJG2 1045 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 AATFQ9NY61 560 aaKnown RBP eCLIP10.71□□□□□ -0.696e-17■■■□□ 16
CHD3-202ENST00000358181 RTL1A6NKG5 1358 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 LIG3P49916 1009 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 PDCD6IPQ8WUM4 868 aaKnown RBP10.71□□□□□ -0.69
CHD3-202ENST00000358181 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 ORAI2Q96SN7 254 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 ZBTB12Q9Y330 459 aaPredicted RBP10.71□□□□□ -0.69
CHD3-202ENST00000358181 URB2Q14146 1524 aaKnown RBP10.71□□□□□ -0.69
CHD3-202ENST00000358181 SPTLC2O15270 562 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 APOA4P06727 396 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 LIG4P49917 911 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms