RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SCRN1Q12765 414 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 USP37Q86T82 979 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 SPZ1Q9BXG8 430 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 MYH13Q9UKX3 1938 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 AP5Z1O43299 807 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 PRPF6O94906 941 aaKnown RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 UQCRFS1P1P0C7P4 283 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 NR1D1P20393 614 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 CRELD2Q6UXH1 353 aaPredicted RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 MIEF2Q96C03 454 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 CALML4Q96GE6 196 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 NEUROD6Q96NK8 337 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 FAM53CQ9NYF3 392 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 HPCAL4Q9UM19 191 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 CCDC194A0A1B0GVG4 234 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 MFAP3LO75121 409 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 SASH3O75995 380 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 NOSTRINQ8IVI9 506 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 SUN1O94901 812 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 MRPS35P82673 323 aaKnown RBP7.28□□□□□ -1.24
TRIM38-201ENST00000357085 SPDYCQ5MJ68 293 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 SLC30A9Q6PML9 568 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 ERMNQ8TAM6 284 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 CNKSR2Q8WXI2 1034 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 GBP5Q96PP8 586 aa7.28□□□□□ -1.24
TRIM38-201ENST00000357085 ALKQ9UM73 1620 aa7.27□□□□□ -1.24
TRIM38-201ENST00000357085 MED23Q9ULK4 1368 aa7.27□□□□□ -1.24
TRIM38-201ENST00000357085 GPTP24298 496 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 MAP3K12Q12852 859 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 PPP1R7Q15435 360 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 RRAGBQ5VZM2 374 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 PIP4K2CQ8TBX8 421 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 IFT81Q8WYA0 676 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 ZNF213O14771 459 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 SKIP12755 728 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 MTIF2P46199 727 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC6Q16204 474 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 DENND2CQ68D51 928 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 FBXL16Q8N461 479 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 ALG1Q9BT22 464 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 KAT14Q9H8E8 782 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 KLHL14Q9P2G3 628 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 PTPRMP28827 1452 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 C3P01024 1663 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 MARCH6O60337 910 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 MARCKSP29966 332 aaPredicted RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 RESTQ13127 1097 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 PPP1R2P3Q6NXS1 205 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 PPP1R12CQ9BZL4 782 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 NALCNQ8IZF0 1738 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 ENO4A6NNW6 628 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 STAT6P42226 847 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 INTS8Q75QN2 995 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 SMC6Q96SB8 1091 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 MPHOSPH6Q99547 160 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 FOXP1Q9H334 677 aaPredicted RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 OVOS2A0A0J9YW53 1432 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 OVOS2Q6IE36 1432 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 C21orf2O43822 256 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 PAX7P23759 505 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 CDK17Q00537 523 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 BEND6Q5SZJ8 279 aaPredicted RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 WDR78Q5VTH9 848 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 RESP18Q5W5W9 173 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 TTC19Q6DKK2 380 aaPredicted RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 RASEFQ8IZ41 740 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 BBOF1Q8ND07 529 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 SNRKQ9NRH2 765 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 XRN1Q8IZH2 1706 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 A0A1W2PQC6 194 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 VWA3AA6NCI4 1184 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 DESP17661 470 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 SEC62Q99442 399 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 SLC26A4O43511 780 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 KRT18P05783 430 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 MRPL12P52815 198 aaKnown RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 SAMD1Q6SPF0 538 aaPredicted RBP7.27□□□□□ -1.25
TRIM38-201ENST00000357085 KBTBD3Q8NAB2 608 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 ANKRD2Q9GZV1 360 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 CSRNP2Q9H175 543 aa7.27□□□□□ -1.25
TRIM38-201ENST00000357085 LMNB1P20700 586 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 KRT2P35908 639 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 PDE6CP51160 858 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 MFSD6Q6ZSS7 791 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 MAIP1Q8WWC4 291 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 DHTKD1Q96HY7 919 aaPredicted RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 MTUS1Q9ULD2 1270 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 ABCB11O95342 1321 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 RPSAP08865 295 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CTNNAL1Q9UBT7 734 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 TPX2Q9ULW0 747 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 EMILIN1Q9Y6C2 1016 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 PTPRUQ92729 1446 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 FAM83GA6ND36 823 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC188H7C350 402 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 EXOC5O00471 708 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 GTPBP6O43824 516 aaPredicted RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CCND1P24385 295 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 USP14P54578 494 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms