RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CLGNO14967 610 aa15.73■□□□□ 0.11
SREBF1-202ENST00000355815 MICAL1Q8TDZ2 1067 aa15.73■□□□□ 0.11
SREBF1-202ENST00000355815 KDM6AO15550 1401 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-202ENST00000355815 GPR161Q8N6U8 529 aaKnown RBP15.73■□□□□ 0.11
SREBF1-202ENST00000355815 CALML4Q96GE6 196 aa15.73■□□□□ 0.11
SREBF1-202ENST00000355815 SAMM50Q9Y512 469 aa15.73■□□□□ 0.11
SREBF1-202ENST00000355815 CTDP1Q9Y5B0 961 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-202ENST00000355815 GSG1L2A8MUP6 293 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 RGS22Q8NE09 1264 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 PPP1R12CQ9BZL4 782 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 KRT9P35527 623 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 GRIN1Q05586 938 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 MLKLQ8NB16 471 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 DPF2Q92785 391 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 CCNT1O60563 726 aaKnown RBP15.72■□□□□ 0.11
SREBF1-202ENST00000355815 RBM6P78332 1123 aaKnown RBP15.72■□□□□ 0.11
SREBF1-202ENST00000355815 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 KSR1Q8IVT5 923 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 EHBP1Q8NDI1 1231 aa15.72■□□□□ 0.11
SREBF1-202ENST00000355815 PPANQ9NQ55 473 aaKnown RBP15.72■□□□□ 0.11
SREBF1-202ENST00000355815 TCP10Q12799 353 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 IQCB1Q15051 598 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 TRAPPC3LQ5T215 181 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 TBC1D7Q9P0N9 293 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 SMIM22K7EJ46 135 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 PSMA7O14818 248 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 RPSAP08865 295 aaKnown RBP15.71■□□□□ 0.11
SREBF1-202ENST00000355815 ARID4AP29374 1257 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-202ENST00000355815 GNGT1P63211 74 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 PNMA1Q8ND90 353 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 GOLGA5Q8TBA6 731 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 RSRC1Q96IZ7 334 aaKnown RBP15.71■□□□□ 0.11
SREBF1-202ENST00000355815 LY9Q9HBG7 655 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■■■■ 106.6
SREBF1-202ENST00000355815 TRIM66O15016 1216 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 CALM1P0DP23 149 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 CALM2P0DP24 149 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 CALM3P0DP25 149 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 LONRF2Q1L5Z9 754 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 CABS1Q96KC9 395 aa15.71■□□□□ 0.11
SREBF1-202ENST00000355815 UBN2Q6ZU65 1347 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 MMP1P03956 469 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 IFNAR1P17181 557 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 E2F5Q15329 346 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 WWC2Q6AWC2 1192 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 TRIM31Q9BZY9 425 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 FAM204AQ9H8W3 233 aa15.71■□□□□ 0.1
SREBF1-202ENST00000355815 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-202ENST00000355815 USP17L3A6NCW0 530 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 USP17L4A6NCW7 530 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 KCTD16Q68DU8 428 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 USP17L1Q7RTZ2 530 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 DHX40Q8IX18 779 aaKnown RBP15.7■□□□□ 0.1
SREBF1-202ENST00000355815 CALML3P27482 149 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 PDE6BP35913 854 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 PLA2G4DQ86XP0 818 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 ZC3H12CQ9C0D7 883 aaKnown RBP15.7■□□□□ 0.1
SREBF1-202ENST00000355815 BIN2Q9UBW5 565 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-202ENST00000355815 PPP2R2CQ9Y2T4 447 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
SREBF1-202ENST00000355815 CASP7P55210 303 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 CCDC25Q86WR0 208 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 UBLCP1Q8WVY7 318 aaPredicted RBP15.7■□□□□ 0.1
SREBF1-202ENST00000355815 FUCA2Q9BTY2 467 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 MAN1B1Q9UKM7 699 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 HPS5Q9UPZ3 1129 aa15.7■□□□□ 0.1
SREBF1-202ENST00000355815 CCDC160A6NGH7 325 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 FMNL1O95466 1100 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-202ENST00000355815 GCKP35557 465 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 ACTN2P35609 894 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 PDE4DQ08499 809 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 TMEM266Q2M3C6 531 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 COL15A1P39059 1388 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 EFCAB8A8MWE9 144 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 SPAG5Q96R06 1193 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 NYXQ9GZU5 481 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 FRMPD2Q68DX3 1309 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-202ENST00000355815 GCOM1H8Y6P7 765 aaPredicted RBP15.69■□□□□ 0.1
SREBF1-202ENST00000355815 MYZAPP0CAP1 466 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 TBC1D8BQ0IIM8 1120 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 KCNB2Q92953 911 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 IMPACTQ9P2X3 320 aa15.69■□□□□ 0.1
SREBF1-202ENST00000355815 MKRN1Q9UHC7 482 aaKnown RBP15.69■□□□□ 0.1
SREBF1-202ENST00000355815 BMP15O95972 392 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 PTPROQ16827 1216 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 PXDNLA1KZ92 1463 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 SCNN1DP51172 638 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 GTF2IP78347 998 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 B4GALNT4Q76KP1 1039 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 CNGA4Q8IV77 575 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms