RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 FOXD4L6Q3SYB3 417 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-202ENST00000355301 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 FOXD4L3Q6VB84 417 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-202ENST00000355301 PNMA8AQ86V59 439 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-202ENST00000355301 SH2D4AQ9H788 454 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
NPHP1-202ENST00000355301 TCHHQ07283 1943 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 MYH15Q9Y2K3 1946 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 FRMPD2Q68DX3 1309 aaPredicted RBP11.1□□□□□ -0.63
NPHP1-202ENST00000355301 DOCK1Q14185 1865 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 NDUFB10O96000 172 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 PTMSP20962 102 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 ECE1P42892 770 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 SLC1A4P43007 532 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
NPHP1-202ENST00000355301 NBR1Q14596 966 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 FAM177A1Q8N128 213 aaPredicted RBP11.1□□□□□ -0.63
NPHP1-202ENST00000355301 ACER1Q8TDN7 264 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 SHISA4Q96DD7 197 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 CPVLQ9H3G5 476 aa11.1□□□□□ -0.63
NPHP1-202ENST00000355301 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
NPHP1-202ENST00000355301 U2AF2P26368 475 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPHP1-202ENST00000355301 INPP5BP32019 993 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 KCTD1Q719H9 257 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 KRT26Q7Z3Y9 468 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
NPHP1-202ENST00000355301 WRNIP1Q96S55 665 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 PHF20Q9BVI0 1012 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 UBA5Q9GZZ9 404 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 SH3GLB2Q9NR46 395 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
NPHP1-202ENST00000355301 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 ADM5C9JUS6 153 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 KRT85P78386 507 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPHP1-202ENST00000355301 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 ATL3Q6DD88 541 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 TMEM87AQ8NBN3 555 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 FOXP1Q9H334 677 aaPredicted RBP11.09□□□□□ -0.63
NPHP1-202ENST00000355301 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 KCNJ14Q9UNX9 436 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
NPHP1-202ENST00000355301 RAD21O60216 631 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 BMP3P12645 472 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 DIS3L2Q8IYB7 885 aaKnown RBP11.08□□□□□ -0.64
NPHP1-202ENST00000355301 ADGRF4Q8IZF3 695 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 PIBF1Q8WXW3 757 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 MTMR8Q96EF0 704 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 PIGSQ96S52 555 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 JMJD4Q9H9V9 463 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 BARHL2Q9NY43 387 aa11.08□□□□□ -0.64
NPHP1-202ENST00000355301 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
NPHP1-202ENST00000355301 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 NPY5RQ15761 445 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 KIAA1755Q5JYT7 1200 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 NOL9Q5SY16 702 aaKnown RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 BTNL9Q6UXG8 535 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 ZKSCAN4Q969J2 545 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 SCAND2PQ9GZW5 306 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 VAT1LQ9HCJ6 419 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 CFAP45Q9UL16 551 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 FZD1Q9UP38 647 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 PAPPA2Q9BXP8 1791 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 STXBP3O00186 592 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 PPP1R12BO60237 982 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 PTPRAP18433 802 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 NCLP19338 710 aaKnown RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 SLC16A2P36021 539 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 GNL2Q13823 731 aaKnown RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 CSPP1Q1MSJ5 1256 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 EAPPQ56P03 285 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 MYSM1Q5VVJ2 828 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 DLK2Q6UY11 383 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 CCDC84Q86UT8 332 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 HOMER1Q86YM7 354 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 NOSTRINQ8IVI9 506 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 SPICE1Q8N0Z3 855 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 CCDC148Q8NFR7 591 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 GPKOWQ92917 476 aaPredicted RBP eCLIP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
NPHP1-202ENST00000355301 WDR18Q9BV38 432 aa11.07□□□□□ -0.64
NPHP1-202ENST00000355301 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms