RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 HSD3B7Q9H2F3 369 aa12.23□□□□□ -0.45
SND1-201ENST00000354725 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
SND1-201ENST00000354725 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
SND1-201ENST00000354725 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
SND1-201ENST00000354725 SETSIPP0DME0 302 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 ARHGAP29Q52LW3 1261 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 PDILTQ8N807 584 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
SND1-201ENST00000354725 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 PAG1Q9NWQ8 432 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 CHCHD3Q9NX63 227 aaKnown RBP12.22□□□□□ -0.45
SND1-201ENST00000354725 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 GPTP24298 496 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 L2HGDHQ9H9P8 463 aa12.22□□□□□ -0.45
SND1-201ENST00000354725 NCAPHQ15003 741 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 PTPN14Q15678 1187 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 BICD2Q8TD16 824 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 RSPH1Q8WYR4 309 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 SASH3O75995 380 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 NF2P35240 595 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 APOBRQ0VD83 1088 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
SND1-201ENST00000354725 NID2Q14112 1375 aa12.21□□□□□ -0.46
SND1-201ENST00000354725 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.46
SND1-201ENST00000354725 USP5P45974 858 aa12.21□□□□□ -0.46
SND1-201ENST00000354725 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.46
SND1-201ENST00000354725 NEUROD6Q96NK8 337 aa12.21□□□□□ -0.46
SND1-201ENST00000354725 BRIP1Q9BX63 1249 aa12.21□□□□□ -0.46
SND1-201ENST00000354725 GOLGA6L4A6NEF3 574 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 TBC1D8O95759 1140 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 MB21D2Q8IYB1 491 aaPredicted RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 ANO10Q9NW15 660 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 SEC31AO94979 1220 aaKnown RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 YEATS4O95619 227 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 NLGN2Q8NFZ4 835 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 M0R2C6 588 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 CSF1RP07333 972 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 IL15P40933 162 aaPredicted RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 TGFB2P61812 414 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 SNX1Q13596 522 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 ANKRD18AQ8IVF6 992 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 STK11IPQ8N1F8 1099 aa12.2□□□□□ -0.46
SND1-201ENST00000354725 UTP14AQ9BVJ6 771 aaKnown RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
SND1-201ENST00000354725 PSME4Q14997 1843 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 H3BQV1 296 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 IFFO2Q5TF58 517 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 FHDC1Q9C0D6 1143 aaPredicted RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 NYXQ9GZU5 481 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 ITM2BQ9Y287 266 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 RBM47A0AV96 593 aaKnown RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 RNF113AO15541 343 aaKnown RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 FLT3P36888 993 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 C7orf43Q8WVR3 580 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 SRGNP10124 158 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 PECAM1P16284 738 aaPredicted RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 FBXW10Q5XX13 1052 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 E4F1Q66K89 784 aaPredicted RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 NCAPG2Q86XI2 1143 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 PARD3BQ8TEW8 1205 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
SND1-201ENST00000354725 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 HPSEQ9Y251 543 aa12.19□□□□□ -0.46
SND1-201ENST00000354725 GSDMDP57764 484 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 ANTXR2P58335 489 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 LMBR1LQ6UX01 489 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 SAPCD2Q86UD0 394 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 TRIM11Q96F44 468 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 CRACR2AQ9BSW2 395 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 SYT17Q9BSW7 474 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 APLP1P51693 650 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 BLOC1S6Q9UL45 172 aa12.18□□□□□ -0.46
SND1-201ENST00000354725 NDUFA8P51970 172 aa12.17□□□□□ -0.46
SND1-201ENST00000354725 C10orf62Q5T681 223 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms