RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CLTAP09496 248 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 LINGO3P0C6S8 592 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 PNMA8AQ86V59 439 aaPredicted RBP14.77□□□□□ -0.04
IFT88-202ENST00000351808 TRIML1Q8N9V2 468 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 SPATA4Q8NEY3 305 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 STIM2Q9P246 746 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 RTN3O95197 1032 aaPredicted RBP14.77□□□□□ -0.05
IFT88-202ENST00000351808 BYSLQ13895 437 aaKnown RBP14.77□□□□□ -0.05
IFT88-202ENST00000351808 LACTB2Q53H82 288 aaPredicted RBP14.77□□□□□ -0.05
IFT88-202ENST00000351808 PPP4R3AQ6IN85 833 aa14.77□□□□□ -0.05
IFT88-202ENST00000351808 KRI1Q8N9T8 703 aaKnown RBP14.77□□□□□ -0.05
IFT88-202ENST00000351808 SUCLG2Q96I99 432 aa14.77□□□□□ -0.05
IFT88-202ENST00000351808 PAIP2Q9BPZ3 127 aaKnown RBP14.77□□□□□ -0.05
IFT88-202ENST00000351808 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.77□□□□□ -0.05
IFT88-202ENST00000351808 PCDHGC5Q9Y5F6 944 aa14.77□□□□□ -0.05
IFT88-202ENST00000351808 MACROD2A1Z1Q3 448 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 GNAT3A8MTJ3 354 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 DNAJC8O75937 253 aaPredicted RBP14.76□□□□□ -0.05
IFT88-202ENST00000351808 FESP07332 822 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 MYBL1P10243 752 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 CASP1P29466 404 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 KRT31Q15323 416 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 KRT40Q6A162 431 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 TRIM74Q86UV6 250 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 TRIM73Q86UV7 250 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 CACNA2D3Q8IZS8 1091 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 KLHL23Q8NBE8 558 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 ALG1Q9BT22 464 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 EHD2Q9NZN4 543 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 KRT86O43790 486 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 DIAPH2O60879 1101 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 GNPTABQ3T906 1256 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 HAUS3Q68CZ6 603 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 ELOA2Q8IYF1 753 aaPredicted RBP14.76□□□□□ -0.05
IFT88-202ENST00000351808 PIK3R5Q8WYR1 880 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 PSMB7Q99436 277 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 DBNLQ9UJU6 430 aaKnown RBP14.76□□□□□ -0.05
IFT88-202ENST00000351808 NFU1Q9UMS0 254 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 OVOS2A0A0G2JMS6 1433 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 OVOS2A0A0J9YW53 1432 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 OVOS2Q6IE36 1432 aa14.76□□□□□ -0.05
IFT88-202ENST00000351808 AHCYL1O43865 530 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 TMOD1P28289 359 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 CUL4BQ13620 913 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 CCT6BQ92526 530 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 KAZALD1Q96I82 304 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 TAB2Q9NYJ8 693 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 G3BP2Q9UN86 482 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 NRKQ7Z2Y5 1582 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 NEFHP12036 1026 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 CARSP49589 748 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 GUCY2FP51841 1108 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 VAV2P52735 878 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 GLE1Q53GS7 698 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 NFXL1Q6ZNB6 911 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 FAM167BQ9BTA0 163 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 KDRP35968 1356 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 ESYT3A0FGR9 886 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 PES1O00541 588 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 PAPOLAP51003 745 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 CWF19L1Q69YN2 538 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 CRELD2Q6UXH1 353 aaPredicted RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 AGAP11Q8TF27 550 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 IFT81Q8WYA0 676 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 NUDT16Q96DE0 195 aaKnown RBP14.75□□□□□ -0.05
IFT88-202ENST00000351808 OSBPL9Q96SU4 736 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 MAP3K2Q9Y2U5 619 aa14.75□□□□□ -0.05
IFT88-202ENST00000351808 TTC26A0AVF1 554 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 SRRM3A6NNA2 597 aaPredicted RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 PPIP5K2O43314 1243 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 TRAPPC3O43617 180 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 CXCR5P32302 372 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 AFMP43652 599 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 LAMB3Q13751 1172 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 USP49Q70CQ1 688 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 MAATS1Q7Z4T9 603 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 PAPOLBQ9NRJ5 636 aaKnown RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 ANKARQ7Z5J8 1434 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 ANO9A1A5B4 782 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 HMGB1P1B2RPK0 211 aaPredicted RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 WASLO00401 505 aaPredicted RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 HSPD1P10809 573 aaKnown RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.058e-10■■■■■ 61.5
IFT88-202ENST00000351808 SMCR8Q8TEV9 937 aaPredicted RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 EZH1Q92800 747 aaPredicted RBP14.74□□□□□ -0.05
IFT88-202ENST00000351808 PANK4Q9NVE7 773 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 SNX12Q9UMY4 172 aa14.74□□□□□ -0.05
IFT88-202ENST00000351808 ZSCAN5CA6NGD5 496 aaPredicted RBP14.73□□□□□ -0.05
IFT88-202ENST00000351808 GNAT1P11488 350 aa14.73□□□□□ -0.05
IFT88-202ENST00000351808 COPB1P53618 953 aaKnown RBP14.73□□□□□ -0.05
IFT88-202ENST00000351808 HAND2P61296 217 aa14.73□□□□□ -0.05
IFT88-202ENST00000351808 TBC1D1Q86TI0 1168 aaPredicted RBP14.73□□□□□ -0.05
IFT88-202ENST00000351808 CCDC63Q8NA47 563 aa14.73□□□□□ -0.05
IFT88-202ENST00000351808 NOC3LQ8WTT2 800 aaKnown RBP14.73□□□□□ -0.05
IFT88-202ENST00000351808 NOP53Q9NZM5 478 aaKnown RBP14.73□□□□□ -0.05
IFT88-202ENST00000351808 LMCD1Q9NZU5 365 aa14.73□□□□□ -0.05
IFT88-202ENST00000351808 PIK3C2BO00750 1634 aa14.73□□□□□ -0.05
IFT88-202ENST00000351808 PHF20L1A8MW92 1017 aa14.73□□□□□ -0.05
IFT88-202ENST00000351808 ACTN4O43707 911 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms