RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 IFT88Q13099 833 aa12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 ANGEL1Q9UNK9 670 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 FAM169AQ9Y6X4 670 aa12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
SMARCE1-202ENST00000348513 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 TXNDC9O14530 226 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 GFAPP14136 432 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 GJA8P48165 433 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 DEUP1Q05D60 604 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 TAF12Q16514 161 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 VPS16Q9H269 839 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 RASAL2Q9UJF2 1139 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 PYCARDQ9ULZ3 195 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 SLFN14P0C7P3 912 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 BASP1P80723 227 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 ZBTB16Q05516 673 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 CFAP157Q5JU67 520 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 PROCA1Q8NCQ7 364 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 SLC1A4P43007 532 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 RASSF2P50749 326 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 KRT83P78385 493 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 NME8Q8N427 588 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 MCUR1Q96AQ8 359 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 KRT86O43790 486 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 RNF40O75150 1001 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 KRT9P35527 623 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 ACTN3Q08043 901 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 IFT81Q8WYA0 676 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 FNBP1Q96RU3 617 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 SCINQ9Y6U3 715 aa12.22□□□□□ -0.45
SMARCE1-202ENST00000348513 POLR2DO15514 142 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 GTF2IP78347 998 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 SFSWAPQ12872 951 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 CCDC25Q86WR0 208 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 LMBRD1Q9NUN5 540 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 SORBS3O60504 671 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 PDE6BP35913 854 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 SLC44A4Q53GD3 710 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 GJC2Q5T442 439 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 ANO1Q5XXA6 986 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 OSBPL1AQ9BXW6 950 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 NOD1Q9Y239 953 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 FERP16591 822 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 LTKP29376 864 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 ITFG2Q969R8 447 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 CCDC68Q9H2F9 335 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 Q9H521 79 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
SMARCE1-202ENST00000348513 PPIP5K2O43314 1243 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 EPB41P11171 864 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 DYMQ7RTS9 669 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 TEX9Q8N6V9 391 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 KBTBD3Q8NAB2 608 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 USP33Q8TEY7 942 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 LMBR1Q8WVP7 490 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 ZNF653Q96CK0 615 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 XAB2Q9HCS7 855 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 CTTNBP2NLQ9P2B4 639 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 NEURL1BA8MQ27 555 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 CFBP00751 764 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 PRR16Q569H4 304 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 UBLCP1Q8WVY7 318 aaPredicted RBP12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 PRPF31Q8WWY3 499 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 IWS1Q96ST2 819 aa12.21□□□□□ -0.46
SMARCE1-202ENST00000348513 NOP56O00567 594 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 FLOT1O75955 427 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 VSIG1Q86XK7 387 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 KIAA0825Q8IV33 1275 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 APLFQ8IW19 511 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 KIFC2Q96AC6 838 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 INAQ16352 499 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 ADAM21Q9UKJ8 722 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 IRX4P78413 519 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 SEPT2Q15019 361 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 TTC38Q5R3I4 469 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 ANKRD7Q92527 254 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 MAST3O60307 1309 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 JAK2O60674 1132 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 SKIP12755 728 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 RPL13P26373 211 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 GYG1P46976 350 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms