RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SHROOM1Q2M3G4 852 aaPredicted RBP24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 GPATCH4Q5T3I0 446 aaKnown RBP24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 SAMD7Q7Z3H4 446 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 GPC2Q8N158 579 aa24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 RRP36Q96EU6 259 aaKnown RBP24.72■■□□□ 1.55
TSPAN3-202ENST00000346495 FRMPD2Q68DX3 1309 aaPredicted RBP24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 GH2P01242 217 aa24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 TBC1D10BQ4KMP7 808 aaPredicted RBP24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 RILPL1Q5EBL4 403 aa24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 ILDR2Q71H61 639 aa24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 OXER1Q8TDS5 423 aa24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 RIOX1Q9H6W3 641 aa24.71■■□□□ 1.55
TSPAN3-202ENST00000346495 MAP3K10Q02779 954 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 NR5A1Q13285 461 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 RASA3Q14644 834 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 RRP1BQ14684 758 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 SF3A1Q15459 793 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 CCDC183Q5T5S1 534 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 CCDC148Q8NFR7 591 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 BICD2Q8TD16 824 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 DCAF4Q8WV16 495 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 SEC63Q9UGP8 760 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 ISY1Q9ULR0 285 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 SYNPO2Q9UMS6 1093 aa24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 GOLGB1Q14789 3259 aaKnown RBP24.7■■□□□ 1.54
TSPAN3-202ENST00000346495 SPTLC2O15270 562 aa24.69■■□□□ 1.54
TSPAN3-202ENST00000346495 DEKP35659 375 aaKnown RBP24.69■■□□□ 1.54
TSPAN3-202ENST00000346495 ME1P48163 572 aa24.69■■□□□ 1.54
TSPAN3-202ENST00000346495 SIAH1Q8IUQ4 282 aa24.69■■□□□ 1.54
TSPAN3-202ENST00000346495 VEGFAP15692 232 aaPredicted RBP24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 SLC39A14Q15043 492 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 NPY5RQ15761 445 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 CCDC96Q2M329 555 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 GPKOWQ92917 476 aaPredicted RBP eCLIP24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 UBA5Q9GZZ9 404 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 CPVLQ9H3G5 476 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 GPCPD1Q9NPB8 672 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 BARHL2Q9NY43 387 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 GPRC5DQ9NZD1 345 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 JAG1P78504 1218 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 SLFN13Q68D06 897 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 WWC2Q6AWC2 1192 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 GALNT17Q6IS24 598 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 HEATR3Q7Z4Q2 680 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 CDAN1Q8IWY9 1227 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 GMCL1P1Q8NEA9 526 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 HACL1Q9UJ83 578 aa24.68■■□□□ 1.54
TSPAN3-202ENST00000346495 GOLGA6L3A6NEY3 463 aa24.67■■□□□ 1.54
TSPAN3-202ENST00000346495 STXBP3O00186 592 aa24.67■■□□□ 1.54
TSPAN3-202ENST00000346495 LETM1O95202 739 aaPredicted RBP24.67■■□□□ 1.54
TSPAN3-202ENST00000346495 CCDC12Q8WUD4 166 aaPredicted RBP24.67■■□□□ 1.54
TSPAN3-202ENST00000346495 VAT1LQ9HCJ6 419 aa24.67■■□□□ 1.54
TSPAN3-202ENST00000346495 hCG_1984214I3L0E3 225 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 LIG1P18858 919 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 ADALQ6DHV7 355 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 MIGA2Q7L4E1 593 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 ZNF713Q8N859 430 aaPredicted RBP24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 JMYQ8N9B5 988 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 TNFRSF25Q93038 417 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 PIGSQ96S52 555 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 ARHGEF10LQ9HCE6 1279 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 ZBTB21Q9ULJ3 1066 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 PCDHA7Q9UN72 937 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 PCDHA4Q9UN74 947 aa24.66■■□□□ 1.54
TSPAN3-202ENST00000346495 FSD2A1L4K1 749 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 PPP6R2O75170 966 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 TOB1P50616 345 aaPredicted RBP24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 PTPAQ15257 358 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 HOMER1Q86YM7 354 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 BLIDQ8IZY5 108 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 DAGLBQ8NCG7 672 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 TEPSINQ96N21 525 aa24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 NOL7Q9UMY1 257 aaKnown RBP24.65■■□□□ 1.54
TSPAN3-202ENST00000346495 A0A1W2PQ27 194 aa24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 A0A1W2PQ64 194 aa24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 A0A1W2PQD8 194 aa24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 YBX3P16989 372 aaKnown RBP eCLIP24.64■■□□□ 1.545e-9■■■□□ 17.7
TSPAN3-202ENST00000346495 SLC1A4P43007 532 aa24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 APOBEC3FQ8IUX4 373 aaKnown RBP24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 CCAR1Q8IX12 1150 aaKnown RBP24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 GMCL1Q96IK5 515 aa24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 RNF181Q9P0P0 153 aa24.64■■□□□ 1.54
TSPAN3-202ENST00000346495 SYCE3A1L190 88 aa24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 F5H6K3 240 aa24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 CAP2P40123 477 aa24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 KLRC3Q07444 240 aa24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 DDX19AQ9NUU7 478 aaKnown RBP24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 CEP131Q9UPN4 1083 aa24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 ASTN2O75129 1339 aaPredicted RBP24.64■■□□□ 1.53
TSPAN3-202ENST00000346495 RAD21O60216 631 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 NAPAP54920 295 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 TTBK2Q6IQ55 1244 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 TYW1BQ6NUM6 668 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 KCTD1Q719H9 257 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 ADGRF4Q8IZF3 695 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 DEFB129Q9H1M3 183 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 ATAD5Q96QE3 1844 aa24.63■■□□□ 1.53
TSPAN3-202ENST00000346495 L1TD1Q5T7N2 865 aaKnown RBP24.62■■□□□ 1.53
TSPAN3-202ENST00000346495 LRSAM1Q6UWE0 723 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms