RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SLAIN1Q8ND83 568 aa19.08■□□□□ 0.65
RAB5C-201ENST00000346213 COA7Q96BR5 231 aa19.08■□□□□ 0.65
RAB5C-201ENST00000346213 TAF6LQ9Y6J9 622 aa19.08■□□□□ 0.65
RAB5C-201ENST00000346213 ANP32AP39687 249 aaKnown RBP19.08■□□□□ 0.64
RAB5C-201ENST00000346213 ZNF444Q8N0Y2 327 aaPredicted RBP19.08■□□□□ 0.64
RAB5C-201ENST00000346213 MKL1Q969V6 931 aa19.08■□□□□ 0.64
RAB5C-201ENST00000346213 COL11A1P12107 1806 aaPredicted RBP19.08■□□□□ 0.64
RAB5C-201ENST00000346213 RAD21O60216 631 aa19.07■□□□□ 0.64
RAB5C-201ENST00000346213 NOVP48745 357 aa19.07■□□□□ 0.64
RAB5C-201ENST00000346213 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
RAB5C-201ENST00000346213 PXYLP1Q8TE99 480 aa19.07■□□□□ 0.64
RAB5C-201ENST00000346213 SPATC1LQ9H0A9 340 aa19.07■□□□□ 0.64
RAB5C-201ENST00000346213 LAMA4Q16363 1823 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 MYH4Q9Y623 1939 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 ORC4O43929 436 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 TSPY3P0CV98 308 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 TSPY8P0CW00 308 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 MAPK4P31152 587 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 PLEKHH3Q7Z736 793 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 NBPF11Q86T75 865 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 NPLOC4Q8TAT6 608 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
RAB5C-201ENST00000346213 PPP1R9AQ9ULJ8 1098 aa19.06■□□□□ 0.64
RAB5C-201ENST00000346213 IGHA2P01877 340 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 PDE4BQ07343 736 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 GTF3C2Q8WUA4 911 aaPredicted RBP19.05■□□□□ 0.64
RAB5C-201ENST00000346213 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 VWA5AO00534 786 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 TAL1P17542 331 aaPredicted RBP19.05■□□□□ 0.64
RAB5C-201ENST00000346213 ERCC3P19447 782 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 PTPREP23469 700 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 CHMLP26374 656 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 PTH1RQ03431 593 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 GRB14Q14449 540 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 RCSD1Q6JBY9 416 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 UBE2Q1Q7Z7E8 422 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 GOPCQ9HD26 462 aa19.05■□□□□ 0.64
RAB5C-201ENST00000346213 TTLL1O95922 423 aa19.04■□□□□ 0.64
RAB5C-201ENST00000346213 MAP3K21Q5TCX8 1036 aa19.04■□□□□ 0.64
RAB5C-201ENST00000346213 RNF208Q9H0X6 261 aa19.04■□□□□ 0.64
RAB5C-201ENST00000346213 PAK6Q9NQU5 681 aaPredicted RBP19.04■□□□□ 0.64
RAB5C-201ENST00000346213 BIN2Q9UBW5 565 aaPredicted RBP19.04■□□□□ 0.64
RAB5C-201ENST00000346213 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
RAB5C-201ENST00000346213 TSPY2A6NKD2 308 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 RANBP6O60518 1105 aaKnown RBP19.03■□□□□ 0.64
RAB5C-201ENST00000346213 COBLO75128 1261 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
RAB5C-201ENST00000346213 RRP12Q5JTH9 1297 aaKnown RBP19.03■□□□□ 0.64
RAB5C-201ENST00000346213 WDR78Q5VTH9 848 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 GMCL1P1Q8NEA9 526 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 STAG1Q8WVM7 1258 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 NUDT12Q9BQG2 462 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 HOXC10Q9NYD6 342 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 ZNF236Q9UL36 1845 aa19.03■□□□□ 0.64
RAB5C-201ENST00000346213 MAP2K5Q13163 448 aa19.02■□□□□ 0.64
RAB5C-201ENST00000346213 HMGCRP04035 888 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 GJB1P08034 283 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 GJA8P48165 433 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 MNX1P50219 401 aaPredicted RBP19.01■□□□□ 0.63
RAB5C-201ENST00000346213 PLS1Q14651 629 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 AKNAD1Q5T1N1 836 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 SLFN13Q68D06 897 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 U2AF1L4Q8WU68 220 aaKnown RBP19.01■□□□□ 0.63
RAB5C-201ENST00000346213 SOCS4Q8WXH5 440 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 APBA2Q99767 749 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 ANP32EQ9BTT0 268 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 DSCC1Q9BVC3 393 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 XRCC5P13010 732 aaKnown RBP19.01■□□□□ 0.63
RAB5C-201ENST00000346213 ADORA2AP29274 412 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 CCND3P30281 292 aaPredicted RBP19.01■□□□□ 0.63
RAB5C-201ENST00000346213 SNAP25P60880 206 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 CACNB2Q08289 660 aaPredicted RBP19.01■□□□□ 0.63
RAB5C-201ENST00000346213 TRPV1Q8NER1 839 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 DEFB118Q96PH6 123 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 SLF1Q9BQI6 1058 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 ZKSCAN3Q9BRR0 538 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 TMEM106CQ9BVX2 250 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 ZNF287Q9HBT7 754 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 STX8Q9UNK0 236 aa19.01■□□□□ 0.63
RAB5C-201ENST00000346213 SLC15A5A6NIM6 579 aa19■□□□□ 0.63
RAB5C-201ENST00000346213 SLC3A2P08195 630 aaKnown RBP19■□□□□ 0.63
RAB5C-201ENST00000346213 MCCP23508 829 aa19■□□□□ 0.63
RAB5C-201ENST00000346213 KCTD1Q719H9 257 aa19■□□□□ 0.63
RAB5C-201ENST00000346213 XRN2Q9H0D6 950 aaKnown RBP eCLIP19■□□□□ 0.63
RAB5C-201ENST00000346213 PCDH10Q9P2E7 1040 aa19■□□□□ 0.63
RAB5C-201ENST00000346213 ZNF536O15090 1300 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 HOXC6P09630 235 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 PRKAR2AP13861 404 aaKnown RBP18.99■□□□□ 0.63
RAB5C-201ENST00000346213 UBXN2AP68543 259 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 TTBK2Q6IQ55 1244 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 NCAPG2Q86XI2 1143 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 SHCBP1Q8NEM2 672 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 DIS3LQ8TF46 1054 aaKnown RBP18.99■□□□□ 0.63
RAB5C-201ENST00000346213 KIFC2Q96AC6 838 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 IPO9Q96P70 1041 aaKnown RBP18.99■□□□□ 0.63
RAB5C-201ENST00000346213 TMEM47Q9BQJ4 181 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 TOMM22Q9NS69 142 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 MTMR7Q9Y216 660 aa18.99■□□□□ 0.63
RAB5C-201ENST00000346213 SGSM2O43147 1006 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms