RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 SIPA1L1O43166 1804 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 MYO1BO43795 1136 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 UVSSAQ2YD98 709 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 USP17L2Q6R6M4 530 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 FMR1NBQ8N0W7 255 aaPredicted RBP28.97■■■□□ 2.23
TRADD-201ENST00000345057 KRI1Q8N9T8 703 aaKnown RBP28.97■■■□□ 2.23
TRADD-201ENST00000345057 BARHL2Q9NY43 387 aa28.97■■■□□ 2.23
TRADD-201ENST00000345057 TRIM75PA6NK02 468 aa28.96■■■□□ 2.23
TRADD-201ENST00000345057 CYTH3O43739 400 aa28.96■■■□□ 2.23
TRADD-201ENST00000345057 MARCKSP29966 332 aaPredicted RBP28.96■■■□□ 2.23
TRADD-201ENST00000345057 CXCL9Q07325 125 aa28.96■■■□□ 2.23
TRADD-201ENST00000345057 TMEM179Q6ZVK1 233 aa28.96■■■□□ 2.23
TRADD-201ENST00000345057 TNFRSF25Q93038 417 aa28.96■■■□□ 2.23
TRADD-201ENST00000345057 PCDHA4Q9UN74 947 aa28.96■■■□□ 2.23
TRADD-201ENST00000345057 GOLGA8HP0CJ92 632 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 NPY5RQ15761 445 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 SPDYE2Q495Y8 402 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 GPATCH4Q5T3I0 446 aaKnown RBP28.95■■■□□ 2.23
TRADD-201ENST00000345057 SASS6Q6UVJ0 657 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 DAGLBQ8NCG7 672 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 FAM151AQ8WW52 585 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 PIBF1Q8WXW3 757 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 NYAP2Q9P242 653 aa28.95■■■□□ 2.23
TRADD-201ENST00000345057 ZNF70Q9UC06 446 aaPredicted RBP28.95■■■□□ 2.23
TRADD-201ENST00000345057 USP17L5A8MUK1 530 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 CCDC173Q0VFZ6 552 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 BLIDQ8IZY5 108 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 LRRC47Q8N1G4 583 aaKnown RBP28.95■■■□□ 2.22
TRADD-201ENST00000345057 CSRNP1Q96S65 589 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 RIOX1Q9H6W3 641 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 SPON1Q9HCB6 807 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 BCS1LQ9Y276 419 aa28.95■■■□□ 2.22
TRADD-201ENST00000345057 ZBTB12Q9Y330 459 aaPredicted RBP28.95■■■□□ 2.22
TRADD-201ENST00000345057 A0A1B0GVL5 298 aa28.94■■■□□ 2.22
TRADD-201ENST00000345057 RPS12P25398 132 aaKnown RBP28.94■■■□□ 2.22
TRADD-201ENST00000345057 HEATR3Q7Z4Q2 680 aa28.94■■■□□ 2.22
TRADD-201ENST00000345057 MKL1Q969V6 931 aa28.94■■■□□ 2.22
TRADD-201ENST00000345057 FAM237AA0A1B0GTK4 181 aa28.93■■■□□ 2.22
TRADD-201ENST00000345057 NFKBIEO00221 500 aa28.93■■■□□ 2.22
TRADD-201ENST00000345057 CAVIN2O95810 425 aa28.93■■■□□ 2.22
TRADD-201ENST00000345057 NDUFA8P51970 172 aa28.93■■■□□ 2.22
TRADD-201ENST00000345057 EIF6P56537 245 aaKnown RBP28.93■■■□□ 2.22
TRADD-201ENST00000345057 WWC2Q6AWC2 1192 aa28.93■■■□□ 2.22
TRADD-201ENST00000345057 ZNF579Q8NAF0 562 aaKnown RBP28.93■■■□□ 2.22
TRADD-201ENST00000345057 TIGD1Q96MW7 591 aa28.93■■■□□ 2.22
TRADD-201ENST00000345057 TYRO3Q06418 890 aa28.92■■■□□ 2.22
TRADD-201ENST00000345057 ABCB5Q2M3G0 1257 aa28.92■■■□□ 2.22
TRADD-201ENST00000345057 CKAP2LQ8IYA6 745 aa28.92■■■□□ 2.22
TRADD-201ENST00000345057 RNF214Q8ND24 703 aa28.92■■■□□ 2.22
TRADD-201ENST00000345057 PCDHB6Q9Y5E3 794 aa28.92■■■□□ 2.22
TRADD-201ENST00000345057 STXBP3O00186 592 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 PFKFB1P16118 471 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 PTPREP23469 700 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 PTGER2P43116 358 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 ZNF543Q08ER8 600 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 SLC35G1Q2M3R5 365 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 RESP18Q5W5W9 173 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 FAM83AQ86UY5 434 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 GPKOWQ92917 476 aaPredicted RBP eCLIP28.91■■■□□ 2.22
TRADD-201ENST00000345057 TCP10L2B9ZVM9 353 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 GNA11P29992 359 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 SDF4Q9BRK5 362 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 SYNPO2Q9UMS6 1093 aa28.91■■■□□ 2.22
TRADD-201ENST00000345057 SRPRBQ9Y5M8 271 aaKnown RBP28.91■■■□□ 2.22
TRADD-201ENST00000345057 BAZ2BQ9UIF8 2168 aaKnown RBP28.9■■■□□ 2.22
TRADD-201ENST00000345057 ATP2B2Q01814 1243 aa28.9■■■□□ 2.22
TRADD-201ENST00000345057 RBM26Q5T8P6 1007 aaKnown RBP28.9■■■□□ 2.22
TRADD-201ENST00000345057 FAM13BQ9NYF5 915 aa28.9■■■□□ 2.22
TRADD-201ENST00000345057 HPSEQ9Y251 543 aa28.9■■■□□ 2.22
TRADD-201ENST00000345057 CLRN2A0PK11 232 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 SYKP43405 635 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 TTC38Q5R3I4 469 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 DCAF4Q8WV16 495 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 ZMYND12Q9H0C1 365 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 C6orf50Q9HD87 102 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 MYH4Q9Y623 1939 aa28.89■■■□□ 2.22
TRADD-201ENST00000345057 ZNF202O95125 648 aa28.89■■■□□ 2.21
TRADD-201ENST00000345057 NAPAP54920 295 aa28.89■■■□□ 2.21
TRADD-201ENST00000345057 ICA1Q05084 483 aa28.89■■■□□ 2.21
TRADD-201ENST00000345057 SHC4Q6S5L8 630 aa28.89■■■□□ 2.21
TRADD-201ENST00000345057 ZBED3Q96IU2 234 aaPredicted RBP28.89■■■□□ 2.21
TRADD-201ENST00000345057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.89■■■□□ 2.21
TRADD-201ENST00000345057 FBXO2Q9UK22 296 aaPredicted RBP28.89■■■□□ 2.21
TRADD-201ENST00000345057 VEGFAP15692 232 aaPredicted RBP28.88■■■□□ 2.21
TRADD-201ENST00000345057 ATP2B1P20020 1258 aa28.88■■■□□ 2.21
TRADD-201ENST00000345057 PIK3AP1Q6ZUJ8 805 aa28.88■■■□□ 2.21
TRADD-201ENST00000345057 FERMT2Q96AC1 680 aa28.88■■■□□ 2.21
TRADD-201ENST00000345057 FRMPD2Q68DX3 1309 aaPredicted RBP28.88■■■□□ 2.21
TRADD-201ENST00000345057 CCDC194A0A1B0GVG4 234 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 ESYT2A0FGR8 921 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 FAM196BA6NMK8 535 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 EEF2P13639 858 aaKnown RBP28.87■■■□□ 2.21
TRADD-201ENST00000345057 RASGRP2Q7LDG7 609 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 HOMER1Q86YM7 354 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 CLEC10AQ8IUN9 316 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 PPP1R9BQ96SB3 815 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 TNNI2P48788 182 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 CCDC96Q2M329 555 aa28.87■■■□□ 2.21
TRADD-201ENST00000345057 EARS2Q5JPH6 523 aaKnown RBP28.87■■■□□ 2.21
TRADD-201ENST00000345057 FAM200AQ8TCP9 573 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms