RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 B4GALNT3Q6L9W6 998 aa23.82■■□□□ 1.4
CEACAM3-201ENST00000344550 SLC5A4Q9NY91 659 aa23.82■■□□□ 1.4
CEACAM3-201ENST00000344550 PPP1R9AQ9ULJ8 1098 aa23.82■■□□□ 1.4
CEACAM3-201ENST00000344550 A0A0G2JMZ2 1700 aa23.81■■□□□ 1.4
CEACAM3-201ENST00000344550 F5H6K3 240 aa23.81■■□□□ 1.4
CEACAM3-201ENST00000344550 TSPY3P0CV98 308 aa23.81■■□□□ 1.4
CEACAM3-201ENST00000344550 TSPY8P0CW00 308 aa23.81■■□□□ 1.4
CEACAM3-201ENST00000344550 KLRC3Q07444 240 aa23.81■■□□□ 1.4
CEACAM3-201ENST00000344550 GMCL1P1Q8NEA9 526 aa23.81■■□□□ 1.4
CEACAM3-201ENST00000344550 TRIM6-TRIM34B2RNG4 842 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 HIP1O00291 1037 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 FOXP2O15409 715 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 FARP2O94887 1054 aaPredicted RBP23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 FGRP09769 529 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 PRKAR2AP13861 404 aaKnown RBP23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 NT5C2P49902 561 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 WDR78Q5VTH9 848 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 MFSD14CQ5VZR4 134 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 ATG4CQ96DT6 458 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 CEP95Q96GE4 821 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 CLIP2Q9UDT6 1046 aa23.8■■□□□ 1.4
CEACAM3-201ENST00000344550 VWA5AO00534 786 aa23.79■■□□□ 1.4
CEACAM3-201ENST00000344550 PCP11498 1178 aaKnown RBP23.79■■□□□ 1.4
CEACAM3-201ENST00000344550 ERCC3P19447 782 aa23.79■■□□□ 1.4
CEACAM3-201ENST00000344550 PRPF38AQ8NAV1 312 aaKnown RBP23.79■■□□□ 1.4
CEACAM3-201ENST00000344550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.79■■□□□ 1.4
CEACAM3-201ENST00000344550 ZNF236Q9UL36 1845 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 ORC4O43929 436 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 PRDM1O75626 825 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 NDUFB10O96000 172 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 FDX1P10109 184 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 TFAP4Q01664 338 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 FAM83BQ5T0W9 1011 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 OLFML2BQ68BL8 750 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 CCDC129Q6ZRS4 1044 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 RIOX2Q8IUF8 465 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 STK11IPQ8N1F8 1099 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 SLF1Q9BQI6 1058 aa23.78■■□□□ 1.4
CEACAM3-201ENST00000344550 ATP2A1O14983 1001 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 IGHA2P01877 340 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 SDSP20132 328 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 CACNB2Q08289 660 aaPredicted RBP23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 TMEM132BQ14DG7 1078 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 DPP9Q86TI2 863 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 RILPL2Q969X0 211 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 FAM227BQ96M60 508 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 FEM1BQ9UK73 627 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 OGDHLQ9ULD0 1010 aa23.77■■□□□ 1.4
CEACAM3-201ENST00000344550 PARP14Q460N5 1801 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 A0A0D9SFI3 127 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 MSCO60682 206 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 FGAP02671 866 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 HSPD1P10809 573 aaKnown RBP23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 FCER1AP12319 257 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 ADORA2AP29274 412 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 TRIM32Q13049 653 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 PLS1Q14651 629 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 CCDC171Q6TFL3 1326 aa23.76■■□□□ 1.39
CEACAM3-201ENST00000344550 RAD21O60216 631 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 STAT3P40763 770 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 NOVP48745 357 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 NMIQ13287 307 aaPredicted RBP23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 CCL14Q16627 93 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 VPS53Q5VIR6 699 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 NECAB2Q7Z6G3 386 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 NCAPG2Q86XI2 1143 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 GMCL1Q96IK5 515 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 FBXO28Q9NVF7 368 aa23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 ZNF214Q9UL59 606 aaPredicted RBP23.75■■□□□ 1.39
CEACAM3-201ENST00000344550 TSPY2A6NKD2 308 aa23.74■■□□□ 1.39
CEACAM3-201ENST00000344550 REPS2Q8NFH8 660 aa23.74■■□□□ 1.39
CEACAM3-201ENST00000344550 TEX13BQ9BXU2 312 aa23.74■■□□□ 1.39
CEACAM3-201ENST00000344550 DIS3Q9Y2L1 958 aaKnown RBP23.74■■□□□ 1.39
CEACAM3-201ENST00000344550 NR2E3Q9Y5X4 410 aa23.74■■□□□ 1.39
CEACAM3-201ENST00000344550 PLA2G6O60733 806 aa23.73■■□□□ 1.39
CEACAM3-201ENST00000344550 OAZ1P54368 228 aa23.73■■□□□ 1.39
CEACAM3-201ENST00000344550 NRBP1Q9UHY1 535 aa23.73■■□□□ 1.39
CEACAM3-201ENST00000344550 ZBED4O75132 1171 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 BMP3P12645 472 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 FAM47AQ5JRC9 791 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 SLFN13Q68D06 897 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 NPLOC4Q8TAT6 608 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 CHURC1Q8WUH1 139 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 DPF3Q92784 378 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 NBPF3Q9H094 633 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 DIAPH3Q9NSV4 1193 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 TCP11L1Q9NUJ3 509 aa23.72■■□□□ 1.39
CEACAM3-201ENST00000344550 MYH4Q9Y623 1939 aa23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 CTDSPL2Q05D32 466 aa23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 KCTD2Q14681 263 aa23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 LHX8Q68G74 356 aa23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 ZNF589Q86UQ0 364 aaPredicted RBP23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 FAM160B2Q86V87 743 aa23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 RNF41Q9H4P4 317 aaPredicted RBP23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 FLRT1Q9NZU1 646 aa23.71■■□□□ 1.39
CEACAM3-201ENST00000344550 RANBP6O60518 1105 aaKnown RBP23.7■■□□□ 1.38
CEACAM3-201ENST00000344550 PAWRQ96IZ0 340 aaKnown RBP23.7■■□□□ 1.38
CEACAM3-201ENST00000344550 MMP19Q99542 508 aa23.7■■□□□ 1.38
CEACAM3-201ENST00000344550 NUP88Q99567 741 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms