RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 SYCP3Q8IZU3 236 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 JPH2Q9BR39 696 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 PTPROQ16827 1216 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 PUS7LQ9H0K6 701 aaKnown RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 H7C1D1 291 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 TRAF5O00463 557 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 LIFRP42702 1097 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 WDR66Q8TBY9 1149 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 ENOX1Q8TC92 643 aaKnown RBP12.13□□□□□ -0.47
RPL28-201ENST00000344063 MED4Q9NPJ6 270 aa12.13□□□□□ -0.47
RPL28-201ENST00000344063 AATFQ9NY61 560 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPL28-201ENST00000344063 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 KIF4AO95239 1232 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 VIMP08670 466 aaKnown RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 TOGARAM2Q6ZUX3 1019 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 TACO1Q9BSH4 297 aaKnown RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 SAMSN1Q9NSI8 373 aaKnown RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 USP17L21D6R901 530 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 PPLO60437 1756 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 ARID4AP29374 1257 aaPredicted RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 PEX19P40855 299 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 MORC3Q14149 939 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 A6NNZ2 444 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 ARHGAP25P42331 645 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 E2F5Q15329 346 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 ARMCX5Q6P1M9 558 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 HAUS4Q9H6D7 363 aa12.12□□□□□ -0.47
RPL28-201ENST00000344063 FEZ2Q9UHY8 353 aaPredicted RBP12.12□□□□□ -0.47
RPL28-201ENST00000344063 KRT13P13646 458 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 RBL2Q08999 1139 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 CCDC25Q86WR0 208 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 DDAH1O94760 285 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 RPSAP08865 295 aaKnown RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 DNM2P50570 870 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 VWA3BQ502W6 1294 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 FMR1NBQ8N0W7 255 aaPredicted RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 AIFM3Q96NN9 605 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 MROH2AA6NES4 1674 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 WDR19Q8NEZ3 1342 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 CCNT1O60563 726 aaKnown RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 MMP1P03956 469 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 MAGEA1P43355 309 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 CCZ1BP86790 482 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 BPIFA3Q9BQP9 254 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 SCG2P13521 617 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 MAGEA9P43362 315 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
RPL28-201ENST00000344063 CABP7Q86V35 215 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 TMEM51Q9NW97 253 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
RPL28-201ENST00000344063 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
RPL28-201ENST00000344063 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
RPL28-201ENST00000344063 TRAPPC10P48553 1259 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 TFAP4Q01664 338 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 PICALMQ13492 652 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 CCDC6Q16204 474 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
RPL28-201ENST00000344063 CSRNP2Q9H175 543 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 MYOM1P52179 1685 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 BCAMP50895 628 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 HSPA2P54652 639 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 SARNPP82979 210 aaKnown RBP12.1□□□□□ -0.47
RPL28-201ENST00000344063 IFT88Q13099 833 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 PTGDRQ13258 359 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 SDR42E1Q8WUS8 393 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 WDR24Q96S15 920 aa12.1□□□□□ -0.47
RPL28-201ENST00000344063 RASAL2Q9UJF2 1139 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms