RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 USP5P45974 858 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 UBXN1Q04323 297 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 PAK1Q13153 545 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 NBPF5PQ86XG9 351 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 CPVLQ9H3G5 476 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 MYH7P12883 1935 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 KCNJ18B7U540 433 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 FGRP09769 529 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 GOLGA8HP0CJ92 632 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 PRCPP42785 496 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 KCNJ12Q14500 433 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 RCSD1Q6JBY9 416 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 DZIP1Q86YF9 867 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 BLIDQ8IZY5 108 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 SLC44A5Q8NCS7 719 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 GOLGA1Q92805 767 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 COPB1P53618 953 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 GYS2P54840 703 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 ERVK-24P63145 666 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 DIXDC1Q155Q3 683 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 RASGRP2Q7LDG7 609 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 CNGA4Q8IV77 575 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 SLC35F6Q8N357 371 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 SETDB2Q96T68 719 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 IL17RBQ9NRM6 502 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 SAP30BPQ9UHR5 308 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 STX8Q9UNK0 236 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 ORC4O43929 436 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 TBC1D8O95759 1140 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 KRT9P35527 623 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 INF2Q27J81 1249 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 RSRC2Q7L4I2 434 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 CHP1Q99653 195 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 TMEM60Q9H2L4 133 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 ARFGAP3Q9NP61 516 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 ATP8A2Q9NTI2 1148 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 ABHD10Q9NUJ1 306 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
UBE2D3-203ENST00000343106 BAZ2BQ9UIF8 2168 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 NUP98P52948 1817 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 CCDC194A0A1B0GVG4 234 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 RHOXF2BP0C7M4 288 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 KIF5BP33176 963 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 TXLNAP40222 546 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 PMS1P54277 932 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 DTHD1Q6ZMT9 781 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 RHOXF2Q9BQY4 288 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 ANKIB1Q9P2G1 1089 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 TRIM10Q9UDY6 481 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 BCL9LQ86UU0 1499 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 LRP5O75197 1615 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 CTAGE9A4FU28 777 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 GRIK5Q16478 980 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 CT47A1Q5JQC4 288 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 FAM182BQ5T319 152 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 ZNF658Q5TYW1 1059 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 C4orf32Q8N8J7 132 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 TGFBRAP1Q8WUH2 860 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 VAT1LQ9HCJ6 419 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 GUCA1BQ9UMX6 200 aa11.16□□□□□ -0.62
UBE2D3-203ENST00000343106 ITGB4P16144 1822 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 TSPY3P0CV98 308 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 TSPY8P0CW00 308 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 UBA7P41226 1012 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 SMC1AQ14683 1233 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 WWC2Q6AWC2 1192 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 RABGGTAQ92696 567 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 CDCA7Q9BWT1 371 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 LIMA1Q9UHB6 759 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 PCDHA4Q9UN74 947 aa11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 GOLGB1Q14789 3259 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-203ENST00000343106 SEMA3EO15041 775 aa11.14□□□□□ -0.63
UBE2D3-203ENST00000343106 PARP1P09874 1014 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-203ENST00000343106 OAS2P29728 719 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-203ENST00000343106 LONP1P36776 959 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms