RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TFAP4Q01664 338 aa23.98■■□□□ 1.43
SYNE2-201ENST00000341472 MCMDC2Q4G0Z9 681 aa23.98■■□□□ 1.43
SYNE2-201ENST00000341472 NCAPG2Q86XI2 1143 aa23.98■■□□□ 1.43
SYNE2-201ENST00000341472 NEDD1Q8NHV4 660 aa23.98■■□□□ 1.43
SYNE2-201ENST00000341472 MTMR4Q9NYA4 1195 aa23.98■■□□□ 1.43
SYNE2-201ENST00000341472 RBBP6Q7Z6E9 1792 aaKnown RBP23.98■■□□□ 1.43
SYNE2-201ENST00000341472 TSPY3P0CV98 308 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 TSPY8P0CW00 308 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 TMEM132BQ14DG7 1078 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 ANKLE1Q8NAG6 615 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 RILPL2Q969X0 211 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 CEP95Q96GE4 821 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 PAWRQ96IZ0 340 aaKnown RBP23.97■■□□□ 1.43
SYNE2-201ENST00000341472 PPP1R9AQ9ULJ8 1098 aa23.97■■□□□ 1.43
SYNE2-201ENST00000341472 H0YGN5 161 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 SLC25A27O95847 323 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 TTLL1O95922 423 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 NDUFB10O96000 172 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 ALX1Q15699 326 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 FAM47AQ5JRC9 791 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 VPS53Q5VIR6 699 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 NECAB2Q7Z6G3 386 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 PLEKHM2Q8IWE5 1019 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 NPLOC4Q8TAT6 608 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 FAM227BQ96M60 508 aa23.96■■□□□ 1.43
SYNE2-201ENST00000341472 NUP88Q99567 741 aaPredicted RBP23.96■■□□□ 1.43
SYNE2-201ENST00000341472 BAZ2AQ9UIF9 1905 aaKnown RBP23.95■■□□□ 1.42
SYNE2-201ENST00000341472 VWA5AO00534 786 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 FOXP2O15409 715 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 ADORA2AP29274 412 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 STAT3P40763 770 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 OSBPL3Q9H4L5 887 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 SLC5A4Q9NY91 659 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 FLRT1Q9NZU1 646 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 OGDHLQ9ULD0 1010 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 SYNPO2Q9UMS6 1093 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 NR2E3Q9Y5X4 410 aa23.95■■□□□ 1.42
SYNE2-201ENST00000341472 CCND3P30281 292 aaPredicted RBP23.94■■□□□ 1.42
SYNE2-201ENST00000341472 CTDSPL2Q05D32 466 aa23.94■■□□□ 1.42
SYNE2-201ENST00000341472 ABRAQ8N0Z2 381 aa23.94■■□□□ 1.42
SYNE2-201ENST00000341472 SLF1Q9BQI6 1058 aa23.94■■□□□ 1.42
SYNE2-201ENST00000341472 A0A0D9SFI3 127 aa23.93■■□□□ 1.42
SYNE2-201ENST00000341472 FCER1AP12319 257 aa23.93■■□□□ 1.42
SYNE2-201ENST00000341472 NMIQ13287 307 aaPredicted RBP23.93■■□□□ 1.42
SYNE2-201ENST00000341472 RIOX2Q8IUF8 465 aa23.93■■□□□ 1.42
SYNE2-201ENST00000341472 PRPF38AQ8NAV1 312 aaKnown RBP23.93■■□□□ 1.42
SYNE2-201ENST00000341472 NBPF3Q9H094 633 aa23.93■■□□□ 1.42
SYNE2-201ENST00000341472 INCENPQ9NQS7 918 aa23.93■■□□□ 1.42
SYNE2-201ENST00000341472 ANAPC4Q9UJX5 808 aa23.93■■□□□ 1.42
SYNE2-201ENST00000341472 COBLO75128 1261 aa23.92■■□□□ 1.42
SYNE2-201ENST00000341472 FGAP02671 866 aa23.92■■□□□ 1.42
SYNE2-201ENST00000341472 CYP2C19P33261 490 aa23.92■■□□□ 1.42
SYNE2-201ENST00000341472 PPP4R3BQ5MIZ7 849 aa23.92■■□□□ 1.42
SYNE2-201ENST00000341472 DIS3LQ8TF46 1054 aaKnown RBP23.92■■□□□ 1.42
SYNE2-201ENST00000341472 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.92■■□□□ 1.42
SYNE2-201ENST00000341472 MYH7P12883 1935 aa23.92■■□□□ 1.42
SYNE2-201ENST00000341472 SDSP20132 328 aa23.91■■□□□ 1.42
SYNE2-201ENST00000341472 COPB2P35606 906 aa23.91■■□□□ 1.42
SYNE2-201ENST00000341472 OLFML2BQ68BL8 750 aa23.91■■□□□ 1.42
SYNE2-201ENST00000341472 SLFN13Q68D06 897 aa23.91■■□□□ 1.42
SYNE2-201ENST00000341472 LHX8Q68G74 356 aa23.91■■□□□ 1.42
SYNE2-201ENST00000341472 LRRC47Q8N1G4 583 aaKnown RBP23.91■■□□□ 1.42
SYNE2-201ENST00000341472 GMCL1P1Q8NEA9 526 aa23.91■■□□□ 1.42
SYNE2-201ENST00000341472 CTDP1Q9Y5B0 961 aaPredicted RBP23.91■■□□□ 1.42
SYNE2-201ENST00000341472 TSPY2A6NKD2 308 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 EVI5O60447 810 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 RANBP6O60518 1105 aaKnown RBP23.9■■□□□ 1.42
SYNE2-201ENST00000341472 ZBED4O75132 1171 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 CNGA1P29973 690 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 REPS2Q8NFH8 660 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 MMP19Q99542 508 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 FEM1BQ9UK73 627 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 ZNF214Q9UL59 606 aaPredicted RBP23.9■■□□□ 1.42
SYNE2-201ENST00000341472 CEP290O15078 2479 aa23.9■■□□□ 1.42
SYNE2-201ENST00000341472 IGHA2P01877 340 aa23.89■■□□□ 1.41
SYNE2-201ENST00000341472 HSPD1P10809 573 aaKnown RBP23.89■■□□□ 1.41
SYNE2-201ENST00000341472 MNX1P50219 401 aaPredicted RBP23.89■■□□□ 1.41
SYNE2-201ENST00000341472 KIFC2Q96AC6 838 aa23.89■■□□□ 1.41
SYNE2-201ENST00000341472 ORC4O43929 436 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 FGRP09769 529 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 BMP3P12645 472 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 MFAP1P55081 439 aaKnown RBP23.88■■□□□ 1.41
SYNE2-201ENST00000341472 KCTD2Q14681 263 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 HABP4Q5JVS0 413 aaKnown RBP23.88■■□□□ 1.41
SYNE2-201ENST00000341472 ZNF589Q86UQ0 364 aaPredicted RBP23.88■■□□□ 1.41
SYNE2-201ENST00000341472 TEX13BQ9BXU2 312 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 C11orf49Q9H6J7 331 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 STX8Q9UNK0 236 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 PLIN4Q96Q06 1357 aa23.88■■□□□ 1.41
SYNE2-201ENST00000341472 CCDC171Q6TFL3 1326 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 MSCO60682 206 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 SLC34A2O95436 690 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 TRPV1Q8NER1 839 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 IL17RBQ9NRM6 502 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 TOMM22Q9NS69 142 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 DDX20Q9UHI6 824 aaKnown RBP23.87■■□□□ 1.41
SYNE2-201ENST00000341472 ISY1Q9ULR0 285 aaKnown RBP23.87■■□□□ 1.41
SYNE2-201ENST00000341472 COLQQ9Y215 455 aaPredicted RBP23.87■■□□□ 1.41
SYNE2-201ENST00000341472 TACC3Q9Y6A5 838 aa23.87■■□□□ 1.41
SYNE2-201ENST00000341472 SLC4A3P48751 1232 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms