RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 PHKA1P46020 1223 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 RHBDL3P58872 404 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 OLFM4Q6UX06 510 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 ARMC9Q7Z3E5 817 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.23□□□□□ -1.73
CCDC66-202ENST00000341455 CCDC24Q8N4L8 307 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 KBTBD3Q8NAB2 608 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 KLHDC4Q8TBB5 520 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 TRPM4Q8TD43 1214 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 STK32AQ8WU08 396 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 GPATCH3Q96I76 525 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 DBNDD2Q9BQY9 259 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 RIOK1Q9BRS2 568 aaKnown RBP4.23□□□□□ -1.73
CCDC66-202ENST00000341455 GLIS2Q9BZE0 524 aaPredicted RBP4.23□□□□□ -1.73
CCDC66-202ENST00000341455 PAK6Q9NQU5 681 aaPredicted RBP4.23□□□□□ -1.73
CCDC66-202ENST00000341455 TLR7Q9NYK1 1049 aaKnown RBP4.23□□□□□ -1.73
CCDC66-202ENST00000341455 ANAPC4Q9UJX5 808 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 HDAC9Q9UKV0 1011 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 ZMIZ1Q9ULJ6 1067 aa4.23□□□□□ -1.73
CCDC66-202ENST00000341455 HIP1O00291 1037 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 ADD2P35612 726 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 MARSP56192 900 aaKnown RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 SBK1Q52WX2 424 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 TAF7LQ5H9L4 462 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 CCDC158Q5M9N0 1113 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 TTC22Q5TAA0 569 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 BRICD5Q6PL45 260 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 LARGE2Q8N3Y3 721 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 EVI5LQ96CN4 794 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 P2RX7Q99572 595 aaKnown RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 HMX1Q9NP08 348 aaPredicted RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 HELLSQ9NRZ9 838 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 ANKIB1Q9P2G1 1089 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 ZSWIM8A7E2V4 1837 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 RCCD1A6NED2 376 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 SOWAHDA6NJG2 315 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 KIF4BQ2VIQ3 1234 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 NAALADL2Q58DX5 795 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 ZMYM1Q5SVZ6 1142 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 ZSCAN25Q6NSZ9 544 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 APOBEC3HQ6NTF7 200 aaKnown RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 TBC1D9Q6ZT07 1266 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 FBXL16Q8N461 479 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 SNX27Q96L92 541 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 MTA3Q9BTC8 594 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 TRIM34Q9BYJ4 488 aa4.22□□□□□ -1.73
CCDC66-202ENST00000341455 CNOT7Q9UIV1 285 aaKnown RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 NSFL1CQ9UNZ2 370 aaKnown RBP4.22□□□□□ -1.73
CCDC66-202ENST00000341455 ANKRD62A6NC57 917 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 ANKRD33BA6NCL7 494 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 MOXD2PA6NHM9 499 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 WTIPA6NIX2 430 aaPredicted RBP4.21□□□□□ -1.73
CCDC66-202ENST00000341455 FAM177BA6PVY3 158 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 TAF5LO75529 589 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 IGHA2P01877 340 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 VAMP1P23763 118 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 GSK3AP49840 483 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 SCARF1Q14162 830 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 LRRFIP1Q32MZ4 808 aaKnown RBP4.21□□□□□ -1.73
CCDC66-202ENST00000341455 AACSQ86V21 672 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 NPAS4Q8IUM7 802 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 TEPSINQ96N21 525 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 MAF1Q9H063 256 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 MYOZ2Q9NPC6 264 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 EXOC6BQ9Y2D4 811 aa4.21□□□□□ -1.73
CCDC66-202ENST00000341455 NPHP1O15259 732 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 FOXP2O15409 715 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 GNAT2P19087 354 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 GYG1P46976 350 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 TSGA10IPQ3SY00 556 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 KANK3Q6NY19 840 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 KRT26Q7Z3Y9 468 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 HOOK2Q96ED9 719 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 PIH1D3Q9NQM4 214 aaKnown RBP4.21□□□□□ -1.74
CCDC66-202ENST00000341455 PAG1Q9NWQ8 432 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 DAGLAQ9Y4D2 1042 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 WDR19Q8NEZ3 1342 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 RECKO95980 971 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 LDHCP07864 332 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 COL6A1P12109 1028 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 GSPT1P15170 499 aaKnown RBP4.21□□□□□ -1.74
CCDC66-202ENST00000341455 NDUFV2P19404 249 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 HOXD10P28358 340 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 NF2P35240 595 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 GABPAQ06546 454 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 ELOAQ14241 798 aaKnown RBP4.21□□□□□ -1.74
CCDC66-202ENST00000341455 SF3A1Q15459 793 aaKnown RBP4.21□□□□□ -1.74
CCDC66-202ENST00000341455 TTLL5Q6EMB2 1281 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 USP48Q86UV5 1035 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 ZIC5Q96T25 663 aa4.21□□□□□ -1.74
CCDC66-202ENST00000341455 BAZ2AQ9UIF9 1905 aaKnown RBP4.2□□□□□ -1.74
CCDC66-202ENST00000341455 C6orf229H3BNL8 230 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 KDM4AO75164 1064 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 CRKP46108 304 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 SERPINB4P48594 390 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 SP3Q02447 781 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 MECOMQ03112 1051 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 TTC39AQ5SRH9 613 aa4.2□□□□□ -1.74
CCDC66-202ENST00000341455 TATDN1Q6P1N9 297 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms