RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 NKIRAS1Q9NYS0 192 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 A0A1B0GVL5 298 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PALM3A6NDB9 673 aaPredicted RBP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 SMCO2A6NFE2 343 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 USP17L21D6R901 530 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 BPIFB4P59827 614 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ELMSAN1Q6PJG2 1045 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 KRT27Q7Z3Y8 459 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 GTF3C6Q969F1 213 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 WDR11Q9BZH6 1224 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 USP44Q9H0E7 712 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 KANSL2Q9H9L4 492 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ERBB3P21860 1342 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ZEB2O60315 1214 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 GMNNO75496 209 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PTGS1P23219 599 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ADALQ6DHV7 355 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 CHST3Q7LGC8 479 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ARMC9Q7Z3E5 817 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 NEK8Q86SG6 692 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 MYCT1Q8N699 235 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PNMA1Q8ND90 353 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 GLG1Q92896 1179 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 HAUS1Q96CS2 278 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 TIGD1Q96MW7 591 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PSTPIP2Q9H939 334 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 E7EVH7 732 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 GIPC1O14908 333 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PFDN6O15212 129 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PFKFB2O60825 505 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 PRPF6O94906 941 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 LONP1P36776 959 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ZBTB16Q05516 673 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 FAM160B2Q86V87 743 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 OTUD7AQ8TE49 926 aaPredicted RBP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 RNF34Q969K3 372 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 RIOK1Q9BRS2 568 aaKnown RBP8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 TRIM7Q9C029 511 aa8.54□□□□□ -1.04
ATP2B4-201ENST00000341360 ADGRB3O60242 1522 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 A2ML1A8K2U0 1454 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 TAF5LO75529 589 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 TNNC2P02585 160 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 SCG2P13521 617 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CRKLP46109 303 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 SP4Q02446 784 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 KCTD2Q14681 263 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 SETDB1Q15047 1291 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ARHGEF16Q5VV41 709 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CPXCR1Q8N123 301 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 FANCBQ8NB91 859 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ZNF594Q96JF6 807 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CCDC114Q96M63 670 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 NAPGQ99747 312 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 MTA3Q9BTC8 594 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 RNF26Q9BY78 433 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 GUCA1BQ9UMX6 200 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 DAPK3O43293 454 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 NPR1P16066 1061 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 GBP1P32455 592 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ARL1P40616 181 aaPredicted RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 STX17P56962 302 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 SARNPP82979 210 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ARID5AQ03989 594 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CHRNDQ07001 517 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 MTMR3Q13615 1198 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 DCUN1D2Q6PH85 259 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 RUFY4Q6ZNE9 571 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 SIRT2Q8IXJ6 389 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 TBC1D31Q96DN5 1066 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ZNF408Q9H9D4 720 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 GAP43P17677 238 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 PKP1Q13835 747 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ABCB5Q2M3G0 1257 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CCDC63Q8NA47 563 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 NBPF3Q9H094 633 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 MRPL44Q9H9J2 332 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 NRXN1Q9ULB1 1477 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 POLR2DO15514 142 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CHMP2AO43633 222 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ZNF202O95125 648 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 EVCP57679 992 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ALCAMQ13740 583 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 MYOCDQ8IZQ8 938 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CCT6BQ92526 530 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms