RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PDE11AQ9HCR9 933 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 ANAPC5Q9UJX4 755 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 CDV3Q9UKY7 258 aaKnown RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 MAGEB6P1A0A0J9YX57 407 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 PDHA1P08559 390 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 CARSP49589 748 aaKnown RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 ZNF277Q9NRM2 450 aaPredicted RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 WARS2Q9UGM6 360 aaKnown RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 CUX1P39880 1505 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 CREB3O43889 395 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 IGHDP01880 384 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 SLC9A5Q14940 896 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 SLC9C2Q5TAH2 1124 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 TTBK2Q6IQ55 1244 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 DPH5Q9H2P9 285 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 PTPDC1A2A3K4 754 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 HIF1AQ16665 826 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 GLE1Q53GS7 698 aaKnown RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 COPG1Q9Y678 874 aaKnown RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 ZNF75DP51815 510 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 IL9RQ01113 521 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 TRIM50Q86XT4 487 aa14.06□□□□□ -0.16
USP47-202ENST00000339865 LRPPRCP42704 1394 aaKnown RBP14.06□□□□□ -0.16
USP47-202ENST00000339865 TAB3Q8N5C8 712 aaPredicted RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 RAPGEF2Q9Y4G8 1499 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 DNAJC6O75061 913 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 LMNB1P20700 586 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 GUCY2CP25092 1073 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 RNF169Q8NCN4 708 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 FBXL13Q8NEE6 735 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 UIMC1Q96RL1 719 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP47-202ENST00000339865 RIMBP2O15034 1052 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 PLCD1P51178 756 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 ATP6V1E2Q96A05 226 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 ANGPTL3Q9Y5C1 460 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 NEUROG2Q9H2A3 272 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 JRKLQ9Y4A0 524 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 PFDN6O15212 129 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 CBX8Q9HC52 389 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 IPO11Q9UI26 975 aaKnown RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 GARSP41250 739 aaKnown RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 ANKLE2Q86XL3 938 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 TRIM8Q9BZR9 551 aa14.05□□□□□ -0.16
USP47-202ENST00000339865 METTL14Q9HCE5 456 aaKnown RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 FAM207AQ9NSI2 230 aaPredicted RBP14.05□□□□□ -0.16
USP47-202ENST00000339865 NCF2P19878 526 aaPredicted RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 TBCCQ15814 346 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 WDR48Q8TAF3 677 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 GRK7Q8WTQ7 553 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 ZNF229Q9UJW7 825 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 ANGPTL2Q9UKU9 493 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 PARP3Q9Y6F1 533 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 IVNS1ABPQ9Y6Y0 642 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 STX1BP61266 288 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 MRPL28Q13084 256 aaKnown RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 GANCQ8TET4 914 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 ING2Q9H160 280 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 MCM9Q9NXL9 1143 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 DBNLQ9UJU6 430 aaKnown RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 UQCRFS1P1P0C7P4 283 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 PSMC1P62191 440 aaKnown RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 SAAL1Q96ER3 474 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 NLRC4Q9NPP4 1024 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 TAB2Q9NYJ8 693 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 LZTS1Q9Y250 596 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 MYO18AQ92614 2054 aaKnown RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 BUB1O43683 1085 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 CCDC15Q0P6D6 951 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 ANGPTL8Q6UXH0 198 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 TRIM58Q8NG06 486 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 S100BP04271 92 aaPredicted RBP14.04□□□□□ -0.16
USP47-202ENST00000339865 TTLL11Q8NHH1 800 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 SLC13A4Q9UKG4 626 aa14.04□□□□□ -0.16
USP47-202ENST00000339865 CAPN9O14815 690 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 ADCY1Q08828 1119 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 RNF207Q6ZRF8 634 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 SH3GL3Q99963 347 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 ABT1Q9ULW3 272 aaKnown RBP14.03□□□□□ -0.16
USP47-202ENST00000339865 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 DYTNA2CJ06 578 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 ZNF202O95125 648 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 MYCT1Q8N699 235 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 ARHGEF35A5YM69 484 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 KRT75O95678 551 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 DEUP1Q05D60 604 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 LRMPQ12912 555 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 CCDC152Q4G0S7 254 aa14.03□□□□□ -0.16
USP47-202ENST00000339865 TMCO5AQ8N6Q1 288 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms