RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 DDX20Q9UHI6 824 aaKnown RBP10.54□□□□□ -0.72
NECAP1-201ENST00000339754 GGA2Q9UJY4 613 aa10.54□□□□□ -0.72
NECAP1-201ENST00000339754 STRCP1A6NGW2 1772 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ANO9A1A5B4 782 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 RTN2O75298 545 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 MMP1P03956 469 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ZC3H6P61129 1189 aaKnown RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 NNTQ13423 1086 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 RILPL1Q5EBL4 403 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 LMBR1LQ6UX01 489 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ZNF572Q7Z3I7 529 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 TEX11Q8IYF3 940 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 RUBCNQ92622 972 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 DNAJC7Q99615 494 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 PUS7LQ9H0K6 701 aaKnown RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 DSG3P32926 999 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 GUCY1A2P33402 732 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 GUCY1A3Q02108 690 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ITIH3Q06033 890 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 CRYMQ14894 314 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 PTGISQ16647 500 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 WASHC4Q2M389 1173 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 TCP11X2Q5H9J9 407 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 CEP85LQ5SZL2 805 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 RNF187Q5TA31 235 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 KCTD16Q68DU8 428 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ANKRD13DQ6ZTN6 518 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 MICU3Q86XE3 530 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 EGFL6Q8IUX8 553 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 DIS3L2Q8IYB7 885 aaKnown RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 CAVIN3Q969G5 261 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 EPSTI1Q96J88 318 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ZIM3Q96PE6 472 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
NECAP1-201ENST00000339754 CCT8L2Q96SF2 557 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 KCNJ14Q9UNX9 436 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 CTNND2Q9UQB3 1225 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 DUSP10Q9Y6W6 482 aa10.53□□□□□ -0.72
NECAP1-201ENST00000339754 ZBTB43O43298 467 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 KRT86O43790 486 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 HSF2BPO75031 334 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 EPHB4P54760 987 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 FOXO4P98177 505 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 SLC7A5Q01650 507 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 C11orf91Q3C1V1 193 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 TLDC1Q6P9B6 456 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 EMBQ6PCB8 327 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 IQCKQ8N0W5 287 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 MAGEC3Q8TD91 643 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 IGDCC4Q8TDY8 1250 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 POLD4Q9HCU8 107 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 SPEF2Q9C093 1822 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 A0A087WZG4 1122 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 KRT14P02533 472 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 PDHBP11177 359 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 ERCC3P19447 782 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 SEC24CP53992 1094 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 KRT83P78385 493 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
NECAP1-201ENST00000339754 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
NECAP1-201ENST00000339754 PPARAQ07869 468 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 SSRP1Q08945 709 aaKnown RBP10.52□□□□□ -0.73
NECAP1-201ENST00000339754 IFT88Q13099 833 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 DRP2Q13474 957 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 IQCEQ6IPM2 695 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 CCDC70Q6NSX1 233 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 LRP10Q7Z4F1 713 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 MYCBPAPQ8TBZ2 947 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.52□□□□□ -0.73
NECAP1-201ENST00000339754 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.73
NECAP1-201ENST00000339754 JADE2Q9NQC1 790 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 AATFQ9NY61 560 aaKnown RBP eCLIP10.52□□□□□ -0.73
NECAP1-201ENST00000339754 PXDNQ92626 1479 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 STK36Q9NRP7 1315 aa10.52□□□□□ -0.73
NECAP1-201ENST00000339754 TRPM3Q9HCF6 1732 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-201ENST00000339754 RGPD2P0DJD1 1756 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 ZNF233A6NK53 670 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 KCNJ18B7U540 433 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 PPP1R37O75864 691 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 ECM2O94769 699 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-201ENST00000339754 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-201ENST00000339754 IDEP14735 1019 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
NECAP1-201ENST00000339754 UBXN1Q04323 297 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 SPAG1Q07617 926 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 KCNJ12Q14500 433 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 NLRP14Q86W24 1093 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 TBC1D10CQ8IV04 446 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 SPATA4Q8NEY3 305 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 MYL10Q9BUA6 226 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 RWDD2AQ9UIY3 292 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 CAPN11Q9UMQ6 739 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 SNX12Q9UMY4 172 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 SLIT3O75094 1523 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 ATP5J2-PTCD1G3V325 749 aa10.51□□□□□ -0.73
NECAP1-201ENST00000339754 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms