RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC01116-202ENST00000339037 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
LINC01116-202ENST00000339037 TMX2Q9Y320 296 aa18.84■□□□□ 0.61
LINC01116-202ENST00000339037 KBTBD13C9JR72 458 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 SEPT4O43236 478 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 COBLO75128 1261 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 RTP1P59025 263 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 GJC2Q5T442 439 aaPredicted RBP18.83■□□□□ 0.6
LINC01116-202ENST00000339037 SIAH1Q8IUQ4 282 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 DDRGK1Q96HY6 314 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 CCDC17Q96LX7 622 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 VCPKMTQ9H867 229 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 ZBTB40Q9NUA8 1239 aa18.83■□□□□ 0.6
LINC01116-202ENST00000339037 MYH7P12883 1935 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 WDR46O15213 610 aaKnown RBP18.82■□□□□ 0.6
LINC01116-202ENST00000339037 ATP5JP18859 108 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 ANO1Q5XXA6 986 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 ATP11BQ9Y2G3 1177 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 COG6Q9Y2V7 657 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 RLFQ13129 1914 aa18.82■□□□□ 0.6
LINC01116-202ENST00000339037 CYP2D7A0A087X1C5 515 aa18.81■□□□□ 0.6
LINC01116-202ENST00000339037 FCER1AP12319 257 aa18.81■□□□□ 0.6
LINC01116-202ENST00000339037 PLCB2Q00722 1185 aa18.81■□□□□ 0.6
LINC01116-202ENST00000339037 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
LINC01116-202ENST00000339037 HAUS7Q99871 368 aa18.81■□□□□ 0.6
LINC01116-202ENST00000339037 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 USP17L21D6R901 530 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 CDK8P49336 464 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 TMEM132BQ14DG7 1078 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 UBE3CQ15386 1083 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 C16orf86Q6ZW13 317 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 MAML3Q96JK9 1138 aa18.8■□□□□ 0.6
LINC01116-202ENST00000339037 MYH8P13535 1937 aa18.79■□□□□ 0.6
LINC01116-202ENST00000339037 SMIM22K7EJ46 135 aa18.79■□□□□ 0.6
LINC01116-202ENST00000339037 SLC25A27O95847 323 aa18.79■□□□□ 0.6
LINC01116-202ENST00000339037 PRAMEF19Q5SWL8 479 aa18.79■□□□□ 0.6
LINC01116-202ENST00000339037 SLC39A5Q6ZMH5 540 aa18.79■□□□□ 0.6
LINC01116-202ENST00000339037 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
LINC01116-202ENST00000339037 KANSL2Q9H9L4 492 aa18.79■□□□□ 0.6
LINC01116-202ENST00000339037 PRDM5Q9NQX1 630 aaPredicted RBP18.79■□□□□ 0.6
LINC01116-202ENST00000339037 POTEB2H3BUK9 544 aa18.78■□□□□ 0.6
LINC01116-202ENST00000339037 CHGBP05060 677 aa18.78■□□□□ 0.6
LINC01116-202ENST00000339037 EEF2P13639 858 aaKnown RBP18.78■□□□□ 0.6
LINC01116-202ENST00000339037 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
LINC01116-202ENST00000339037 FAM109BQ6ICB4 259 aaPredicted RBP18.78■□□□□ 0.6
LINC01116-202ENST00000339037 GOPCQ9HD26 462 aa18.78■□□□□ 0.6
LINC01116-202ENST00000339037 FBXO28Q9NVF7 368 aa18.78■□□□□ 0.6
LINC01116-202ENST00000339037 SLC4A4Q9Y6R1 1079 aa18.78■□□□□ 0.6
LINC01116-202ENST00000339037 BAZ2AQ9UIF9 1905 aaKnown RBP18.78■□□□□ 0.6
LINC01116-202ENST00000339037 RAD21O60216 631 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 SNX17Q15036 470 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 LRRC41Q15345 812 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 TRIM60Q495X7 471 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 MMP19Q99542 508 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 NRBP1Q9UHY1 535 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 ADAMTS5Q9UNA0 930 aa18.77■□□□□ 0.6
LINC01116-202ENST00000339037 VWA5AO00534 786 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 RARBP10826 455 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 KCTD2Q14681 263 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 RIOX2Q8IUF8 465 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 PUS7LQ9H0K6 701 aaKnown RBP18.76■□□□□ 0.59
LINC01116-202ENST00000339037 ARPP21Q9UBL0 812 aaPredicted RBP18.76■□□□□ 0.59
LINC01116-202ENST00000339037 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
LINC01116-202ENST00000339037 LTBP2Q14767 1821 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 PGK2P07205 417 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 COPB2P35606 906 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 STAT3P40763 770 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 GSE1Q14687 1217 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 FAM83BQ5T0W9 1011 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 C1orf53Q5VUE5 145 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 FAM161BQ96MY7 647 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 GUCD1Q96NT3 240 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 TINF2Q9BSI4 451 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 XPNPEP3Q9NQH7 507 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 PDLIM7Q9NR12 457 aa18.75■□□□□ 0.59
LINC01116-202ENST00000339037 ZNF214Q9UL59 606 aaPredicted RBP18.75■□□□□ 0.59
LINC01116-202ENST00000339037 PARP14Q460N5 1801 aa18.74■□□□□ 0.59
LINC01116-202ENST00000339037 ZNF697Q5TEC3 545 aa18.74■□□□□ 0.59
LINC01116-202ENST00000339037 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
LINC01116-202ENST00000339037 DIS3Q9Y2L1 958 aaKnown RBP18.74■□□□□ 0.59
LINC01116-202ENST00000339037 ROBO3Q96MS0 1386 aa18.73■□□□□ 0.59
LINC01116-202ENST00000339037 SHHQ15465 462 aa18.73■□□□□ 0.59
LINC01116-202ENST00000339037 ZNF792Q3KQV3 632 aa18.73■□□□□ 0.59
LINC01116-202ENST00000339037 RNF180Q86T96 592 aa18.73■□□□□ 0.59
LINC01116-202ENST00000339037 BADQ92934 168 aa18.73■□□□□ 0.59
LINC01116-202ENST00000339037 PHF24Q9UPV7 400 aa18.73■□□□□ 0.59
LINC01116-202ENST00000339037 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
LINC01116-202ENST00000339037 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
LINC01116-202ENST00000339037 TLE2Q04725 743 aa18.72■□□□□ 0.59
LINC01116-202ENST00000339037 C9orf50Q5SZB4 431 aa18.72■□□□□ 0.59
LINC01116-202ENST00000339037 SH3RF1Q7Z6J0 888 aa18.72■□□□□ 0.59
LINC01116-202ENST00000339037 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
LINC01116-202ENST00000339037 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms