RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
COMMD4-202ENST00000338995 RNF180Q86T96 592 aa17.06■□□□□ 0.32
COMMD4-202ENST00000338995 RIOX2Q8IUF8 465 aa17.06■□□□□ 0.32
COMMD4-202ENST00000338995 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-202ENST00000338995 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
COMMD4-202ENST00000338995 ADCYAP1R1P41586 468 aa17.05■□□□□ 0.32
COMMD4-202ENST00000338995 TMEM132BQ14DG7 1078 aa17.05■□□□□ 0.32
COMMD4-202ENST00000338995 LRRC41Q15345 812 aa17.05■□□□□ 0.32
COMMD4-202ENST00000338995 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
COMMD4-202ENST00000338995 SIRT2Q8IXJ6 389 aa17.05■□□□□ 0.32
COMMD4-202ENST00000338995 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
COMMD4-202ENST00000338995 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
COMMD4-202ENST00000338995 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-202ENST00000338995 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 TINF2Q9BSI4 451 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 XPNPEP3Q9NQH7 507 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 ARPP21Q9UBL0 812 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-202ENST00000338995 PPP1R9AQ9ULJ8 1098 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
COMMD4-202ENST00000338995 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 CYP2D7A0A087X1C5 515 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 VWA5AO00534 786 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 LRRFIP1Q32MZ4 808 aaKnown RBP17.03■□□□□ 0.32
COMMD4-202ENST00000338995 GIMAP6Q6P9H5 292 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 GPATCH3Q96I76 525 aa17.03■□□□□ 0.32
COMMD4-202ENST00000338995 SNX17Q15036 470 aa17.02■□□□□ 0.32
COMMD4-202ENST00000338995 TRIM60Q495X7 471 aa17.02■□□□□ 0.32
COMMD4-202ENST00000338995 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
COMMD4-202ENST00000338995 MSL3Q8N5Y2 521 aaKnown RBP17.02■□□□□ 0.32
COMMD4-202ENST00000338995 ZBED4O75132 1171 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 PGK2P07205 417 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 AKR1A1P14550 325 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 SHHQ15465 462 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 ZNF792Q3KQV3 632 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 FAM83BQ5T0W9 1011 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 ZNF444Q8N0Y2 327 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-202ENST00000338995 PRPF38AQ8NAV1 312 aaKnown RBP17.01■□□□□ 0.31
COMMD4-202ENST00000338995 BADQ92934 168 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 SLF1Q9BQI6 1058 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 TEX13BQ9BXU2 312 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
COMMD4-202ENST00000338995 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 FBXO28Q9NVF7 368 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 PHF24Q9UPV7 400 aa17.01■□□□□ 0.31
COMMD4-202ENST00000338995 MINDY4BA8MYZ0 360 aa17■□□□□ 0.31
COMMD4-202ENST00000338995 GNAT2P19087 354 aa17■□□□□ 0.31
COMMD4-202ENST00000338995 TLE2Q04725 743 aa17■□□□□ 0.31
COMMD4-202ENST00000338995 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
COMMD4-202ENST00000338995 STRBPQ96SI9 672 aaKnown RBP17■□□□□ 0.31
COMMD4-202ENST00000338995 TSEN34Q9BSV6 310 aaKnown RBP17■□□□□ 0.31
COMMD4-202ENST00000338995 RCAN3Q9UKA8 241 aa17■□□□□ 0.31
COMMD4-202ENST00000338995 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
COMMD4-202ENST00000338995 LAMA3Q16787 3333 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 ZNF236Q9UL36 1845 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 F5H6K3 240 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 PGK1P00558 417 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-202ENST00000338995 RAG1P15918 1043 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 KLRC3Q07444 240 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 SPC25Q9HBM1 224 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 PDLIM7Q9NR12 457 aa16.99■□□□□ 0.31
COMMD4-202ENST00000338995 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-202ENST00000338995 MYH8P13535 1937 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
COMMD4-202ENST00000338995 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 APPP05067 770 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 CLTBP09497 229 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
COMMD4-202ENST00000338995 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
COMMD4-202ENST00000338995 KBTBD3Q8NAB2 608 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
COMMD4-202ENST00000338995 SMCHD1A6NHR9 2005 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 TRIM43BA6NCK2 446 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
COMMD4-202ENST00000338995 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
COMMD4-202ENST00000338995 TDO2P48775 406 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.97■□□□□ 0.31
COMMD4-202ENST00000338995 APPBP2Q92624 585 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 TRIM43Q96BQ3 446 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-202ENST00000338995 TOX2Q96NM4 488 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 NACAP1Q9BZK3 213 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 SEMA6BQ9H3T3 888 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 FEM1BQ9UK73 627 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 FRMPD3Q5JV73 1810 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms