RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PCDHA4Q9UN74 947 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 HPSEQ9Y251 543 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 PCDHAC2Q9Y5I4 1007 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
HPS1-202ENST00000338546 RAD17O75943 681 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 NDUFA8P51970 172 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 TYRO3Q06418 890 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 CERKLQ49MI3 558 aaPredicted RBP18.64■□□□□ 0.58
HPS1-202ENST00000338546 GPATCH4Q5T3I0 446 aaKnown RBP18.64■□□□□ 0.58
HPS1-202ENST00000338546 RESP18Q5W5W9 173 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 SH3BP5LQ7L8J4 393 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 ZSCAN29Q8IWY8 852 aaPredicted RBP18.64■□□□□ 0.58
HPS1-202ENST00000338546 BLIDQ8IZY5 108 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 SYNPO2Q9UMS6 1093 aa18.64■□□□□ 0.58
HPS1-202ENST00000338546 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.58
HPS1-202ENST00000338546 COL4A5P29400 1685 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 MARCKSP29966 332 aaPredicted RBP18.64■□□□□ 0.57
HPS1-202ENST00000338546 TCP10Q12799 353 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 TNIP1Q15025 636 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 TMEM179Q6ZVK1 233 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 JDP2Q8WYK2 163 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 DNAJC18Q9H819 358 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
HPS1-202ENST00000338546 SEC63Q9UGP8 760 aaKnown RBP18.64■□□□□ 0.57
HPS1-202ENST00000338546 PFKFB1P16118 471 aa18.63■□□□□ 0.57
HPS1-202ENST00000338546 CACNB3P54284 484 aa18.63■□□□□ 0.57
HPS1-202ENST00000338546 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
HPS1-202ENST00000338546 USP17L2Q6R6M4 530 aa18.63■□□□□ 0.57
HPS1-202ENST00000338546 FAM200AQ8TCP9 573 aa18.63■□□□□ 0.57
HPS1-202ENST00000338546 FAM151AQ8WW52 585 aa18.63■□□□□ 0.57
HPS1-202ENST00000338546 BAZ2BQ9UIF8 2168 aaKnown RBP18.63■□□□□ 0.57
HPS1-202ENST00000338546 ESYT2A0FGR8 921 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 USP17L5A8MUK1 530 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 STXBP3O00186 592 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 ZNF202O95125 648 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 WWC2Q6AWC2 1192 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 CIAPIN1Q6FI81 312 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 SHC4Q6S5L8 630 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 CKAP2LQ8IYA6 745 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 FERMT2Q96AC1 680 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 PDLIM2Q96JY6 352 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 ZMYND12Q9H0C1 365 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 ZNF70Q9UC06 446 aaPredicted RBP18.62■□□□□ 0.57
HPS1-202ENST00000338546 FBXO2Q9UK22 296 aaPredicted RBP18.62■□□□□ 0.57
HPS1-202ENST00000338546 PCDHB6Q9Y5E3 794 aa18.62■□□□□ 0.57
HPS1-202ENST00000338546 M0R2N6 131 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
HPS1-202ENST00000338546 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
HPS1-202ENST00000338546 GNA11P29992 359 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 SYKP43405 635 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 CXCL9Q07325 125 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 ZNF543Q08ER8 600 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
HPS1-202ENST00000338546 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 RNF214Q8ND24 703 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 ZBED3Q96IU2 234 aaPredicted RBP18.61■□□□□ 0.57
HPS1-202ENST00000338546 SDF4Q9BRK5 362 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 FAM13BQ9NYF5 915 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 MRVI1Q9Y6F6 885 aa18.61■□□□□ 0.57
HPS1-202ENST00000338546 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
HPS1-202ENST00000338546 TTC38Q5R3I4 469 aa18.6■□□□□ 0.57
HPS1-202ENST00000338546 DCAF4Q8WV16 495 aa18.6■□□□□ 0.57
HPS1-202ENST00000338546 MYO1BO43795 1136 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 TBC1D12O60347 775 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 VEGFAP15692 232 aaPredicted RBP18.59■□□□□ 0.57
HPS1-202ENST00000338546 STX1AQ16623 288 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 ABCB5Q2M3G0 1257 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 PPP1R18Q6NYC8 613 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
HPS1-202ENST00000338546 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 C6orf50Q9HD87 102 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 MYH4Q9Y623 1939 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 EARS2Q5JPH6 523 aaKnown RBP18.59■□□□□ 0.57
HPS1-202ENST00000338546 RBM26Q5T8P6 1007 aaKnown RBP18.59■□□□□ 0.57
HPS1-202ENST00000338546 GPKOWQ92917 476 aaPredicted RBP eCLIP18.59■□□□□ 0.57
HPS1-202ENST00000338546 ANO10Q9NW15 660 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
HPS1-202ENST00000338546 NFKBIEO00221 500 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 ATP2C1P98194 919 aaPredicted RBP18.58■□□□□ 0.56
HPS1-202ENST00000338546 HS1BP3Q53T59 392 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 ARL6IP4Q66PJ3 421 aaKnown RBP18.58■□□□□ 0.56
HPS1-202ENST00000338546 TYW1BQ6NUM6 668 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 PIK3AP1Q6ZUJ8 805 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 GMCL1P1Q8NEA9 526 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 PIBF1Q8WXW3 757 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 UPF1Q92900 1129 aaKnown RBP eCLIP18.58■□□□□ 0.56
HPS1-202ENST00000338546 KIAA1468Q9P260 1216 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 HOOK1Q9UJC3 728 aaKnown RBP18.58■□□□□ 0.56
HPS1-202ENST00000338546 KCNH3Q9ULD8 1083 aa18.58■□□□□ 0.56
HPS1-202ENST00000338546 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
HPS1-202ENST00000338546 PNMA6FA0A0J9YX94 578 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 CCDC194A0A1B0GVG4 234 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 EEF2P13639 858 aaKnown RBP18.57■□□□□ 0.56
HPS1-202ENST00000338546 PTGER2P43116 358 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 NAPAP54920 295 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 ZNF280AP59817 542 aaPredicted RBP18.57■□□□□ 0.56
HPS1-202ENST00000338546 ORC2Q13416 577 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms