RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 NUP98P52948 1817 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 SPEF2Q9C093 1822 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 FAM205AQ6ZU69 1335 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 XIRP1Q702N8 1843 aaKnown RBP10.99□□□□□ -0.65
MSL3-202ENST00000337339 TRIM49BA6NDI0 452 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 SEMA3EO15041 775 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 LDHCP07864 332 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 KMT5BQ4FZB7 885 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 C12orf60Q5U649 245 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 SPATA1Q5VX52 437 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 ZNF771Q7L3S4 317 aaPredicted RBP10.99□□□□□ -0.65
MSL3-202ENST00000337339 ANKRD7Q92527 254 aa10.99□□□□□ -0.65
MSL3-202ENST00000337339 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
MSL3-202ENST00000337339 UBXN1Q04323 297 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 LRRC47Q8N1G4 583 aaKnown RBP10.98□□□□□ -0.65
MSL3-202ENST00000337339 NELFBQ8WX92 580 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 TMEM47Q9BQJ4 181 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■□□ 15.4
MSL3-202ENST00000337339 SSBP05455 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
MSL3-202ENST00000337339 GPSM2P81274 684 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 WDR24Q96S15 920 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 PUF60Q9UHX1 559 aaKnown RBP10.98□□□□□ -0.65
MSL3-202ENST00000337339 GGA1Q9UJY5 639 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 ITGB4P16144 1822 aa10.98□□□□□ -0.65
MSL3-202ENST00000337339 ORC4O43929 436 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TXKP42681 527 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 SCNN1DP51172 638 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 GSTO1P78417 241 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 GRAPQ13588 217 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TC2NQ8N9U0 490 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TRIML1Q8N9V2 468 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 GRAPLQ8TC17 118 aaPredicted RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 MTA3Q9BTC8 594 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TMEM60Q9H2L4 133 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSL3-202ENST00000337339 SRCAPQ6ZRS2 3230 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 FAM237AA0A1B0GTK4 181 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 PARP1P09874 1014 aaKnown RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 TECP42680 631 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 RBM5P52756 815 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSL3-202ENST00000337339 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 PAK1Q13153 545 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 ZNF397Q8NF99 534 aaPredicted RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 GSDMAQ96QA5 445 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TCP11L1Q9NUJ3 509 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 PCDHA4Q9UN74 947 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 XDHP47989 1333 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TAF1P21675 1872 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 EP400Q96L91 3159 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 A0A0U1RQJ8 604 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 IDEP14735 1019 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 ERCC5P28715 1186 aaPredicted RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 RCAN1P53805 252 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 IL17AQ16552 155 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
MSL3-202ENST00000337339 KIF4BQ2VIQ3 1234 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 ATRIPQ8WXE1 791 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 MXD3Q9BW11 206 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 CD209Q9NNX6 404 aa10.97□□□□□ -0.65
MSL3-202ENST00000337339 RPN1P04843 607 aaKnown RBP10.96□□□□□ -0.65
MSL3-202ENST00000337339 SERPINB2P05120 415 aa10.96□□□□□ -0.65
MSL3-202ENST00000337339 CCDC175P0C221 793 aa10.96□□□□□ -0.65
MSL3-202ENST00000337339 SLURP2P0DP57 97 aa10.96□□□□□ -0.65
MSL3-202ENST00000337339 PCP11498 1178 aaKnown RBP10.96□□□□□ -0.65
MSL3-202ENST00000337339 ST5P78524 1137 aa10.96□□□□□ -0.65
MSL3-202ENST00000337339 DPYDQ12882 1025 aa10.96□□□□□ -0.65
MSL3-202ENST00000337339 ZNF569Q5MCW4 686 aa10.96□□□□□ -0.65
MSL3-202ENST00000337339 ZSCAN29Q8IWY8 852 aaPredicted RBP10.96□□□□□ -0.65
MSL3-202ENST00000337339 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.65
MSL3-202ENST00000337339 MAGEC2Q9UBF1 373 aaPredicted RBP10.96□□□□□ -0.65
MSL3-202ENST00000337339 CDK8P49336 464 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 GNAQP50148 359 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 ASIC1P78348 528 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 NPY5RQ15761 445 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 PIGSQ96S52 555 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 ZNF287Q9HBT7 754 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 SHANK3Q9BYB0 1731 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 STX10O60499 249 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 TM4SF1P30408 202 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 CCDC96Q2M329 555 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 PRR5LQ6MZQ0 368 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 HPS3Q969F9 1004 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 COA7Q96BR5 231 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 CDK5RAP3Q96JB5 506 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 SLF1Q9BQI6 1058 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 SRRTQ9BXP5 876 aaKnown RBP10.96□□□□□ -0.66
MSL3-202ENST00000337339 STRCQ7RTU9 1775 aa10.96□□□□□ -0.66
MSL3-202ENST00000337339 CYTH3O43739 400 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms