RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 JAKMIP3Q5VZ66 844 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 SPTY2D1Q68D10 685 aaPredicted RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 PES1O00541 588 aaKnown RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 FGRP09769 529 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 SLC16A2P36021 539 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 LETM2Q2VYF4 491 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 BLIDQ8IZY5 108 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 CERS5Q8N5B7 392 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNCA-201ENST00000336904 COA7Q96BR5 231 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 PPP1R13BQ96KQ4 1090 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 PRIMPOLQ96LW4 560 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 PIGSQ96S52 555 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 BIN2Q9UBW5 565 aaPredicted RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 NID2Q14112 1375 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 CCDC194A0A1B0GVG4 234 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 TRIM49BA6NDI0 452 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 MPHOSPH10O00566 681 aaKnown RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 MORC3Q14149 939 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 ZFPM1Q8IX07 1006 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 CCDC112Q8NEF3 446 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 LRRC15Q8TF66 581 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
SNCA-201ENST00000336904 CEP131Q9UPN4 1083 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 LEMD3Q9Y2U8 911 aa10.07□□□□□ -0.8
SNCA-201ENST00000336904 TAF1LQ8IZX4 1826 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 POLRMTO00411 1230 aaKnown RBP10.06□□□□□ -0.8
SNCA-201ENST00000336904 CALM1P0DP23 149 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 CALM2P0DP24 149 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 CALM3P0DP25 149 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 NAPAP54920 295 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 SNAP25P60880 206 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 CBX1P83916 185 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 TXNRD1Q16881 649 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 DPP8Q6V1X1 898 aaPredicted RBP10.06□□□□□ -0.8
SNCA-201ENST00000336904 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 CCDC88AQ3V6T2 1871 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 G3V3G9 751 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 DCAF8Q5TAQ9 597 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 RRAGBQ5VZM2 374 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 SAMD1Q6SPF0 538 aaPredicted RBP10.06□□□□□ -0.8
SNCA-201ENST00000336904 KIAA0825Q8IV33 1275 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 RBM17Q96I25 401 aaKnown RBP10.06□□□□□ -0.8
SNCA-201ENST00000336904 BPIFA3Q9BQP9 254 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 TTF2Q9UNY4 1162 aaKnown RBP10.06□□□□□ -0.8
SNCA-201ENST00000336904 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 KIAA1551Q9HCM1 1747 aa10.06□□□□□ -0.8
SNCA-201ENST00000336904 FAM237AA0A1B0GTK4 181 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 PPEF1O14829 653 aaPredicted RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 IKBKBO14920 756 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 FANCGO15287 622 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 AKR1B1P15121 316 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 KIF5BP33176 963 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 RHBDL3P58872 404 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 NFIAQ12857 509 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 SBK1Q52WX2 424 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 TOGARAM2Q6ZUX3 1019 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 VPS16Q9H269 839 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 DNAI1Q9UI46 699 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 SCAF8Q9UPN6 1271 aaKnown RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 SYNRGQ9UMZ2 1314 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 CCNT1O60563 726 aaKnown RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 RBM5P52756 815 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNCA-201ENST00000336904 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 OSBPL5Q9H0X9 879 aaPredicted RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 EPC1Q9H2F5 836 aa10.05□□□□□ -0.8
SNCA-201ENST00000336904 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
SNCA-201ENST00000336904 IGSF3O75054 1194 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 SARSP49591 514 aaKnown RBP10.04□□□□□ -0.8
SNCA-201ENST00000336904 KCTD1Q719H9 257 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 COL23A1Q86Y22 540 aaPredicted RBP10.04□□□□□ -0.8
SNCA-201ENST00000336904 VSTM4Q8IW00 320 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 TAB2Q9NYJ8 693 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 HOOK1Q9UJC3 728 aaKnown RBP10.04□□□□□ -0.8
SNCA-201ENST00000336904 COL24A1Q17RW2 1714 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 NHSQ6T4R5 1651 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 STXBP3O00186 592 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 MMP10P09238 476 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 TERF1P54274 439 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 GRM4Q14833 912 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 UBE2SQ16763 222 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 PCDHA4Q9UN74 947 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 ADAMTSL1Q8N6G6 1762 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 SOWAHDA6NJG2 315 aa10.04□□□□□ -0.8
SNCA-201ENST00000336904 NKRFO15226 690 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNCA-201ENST00000336904 TFRCP02786 760 aaKnown RBP10.04□□□□□ -0.8
SNCA-201ENST00000336904 STAT6P42226 847 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms