RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 DPF2Q92785 391 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
LIMK1-201ENST00000336180 ZNF831Q5JPB2 1677 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 PDS5AQ29RF7 1337 aaKnown RBP14.38□□□□□ -0.11
LIMK1-201ENST00000336180 H0YIN7 160 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 CALM1P0DP23 149 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 CALM2P0DP24 149 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 CALM3P0DP25 149 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 JAKMIP3Q5VZ66 844 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 GJA10Q969M2 543 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 MASTLQ96GX5 879 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 DHX8Q14562 1220 aaKnown RBP14.38□□□□□ -0.11
LIMK1-201ENST00000336180 IL17AQ16552 155 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 PFKFB3Q16875 520 aaPredicted RBP14.38□□□□□ -0.11
LIMK1-201ENST00000336180 KCTD1Q719H9 257 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 XPO4Q9C0E2 1151 aaKnown RBP14.38□□□□□ -0.11
LIMK1-201ENST00000336180 FAM13BQ9NYF5 915 aa14.38□□□□□ -0.11
LIMK1-201ENST00000336180 GDF11O95390 407 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 KIF5BP33176 963 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 PDE6BP35913 854 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
LIMK1-201ENST00000336180 PLA2G4DQ86XP0 818 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 COA1Q9GZY4 146 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 BRMS1Q9HCU9 246 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 TRMT1Q9NXH9 659 aaKnown RBP14.37□□□□□ -0.11
LIMK1-201ENST00000336180 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-201ENST00000336180 BIN2Q9UBW5 565 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-201ENST00000336180 RAD17O75943 681 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 NLRP12P59046 1061 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 RASSF8Q8NHQ8 419 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 EEF2KMTQ96G04 330 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 TMEM60Q9H2L4 133 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 TDRD3Q9H7E2 651 aaKnown RBP14.37□□□□□ -0.11
LIMK1-201ENST00000336180 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
LIMK1-201ENST00000336180 CLRN2A0PK11 232 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 PLSCR1O15162 318 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 ECE2O60344 883 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 NAPAP54920 295 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 C16orf86Q6ZW13 317 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 TMC6Q7Z403 805 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
LIMK1-201ENST00000336180 CRKP46108 304 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 PRDM10Q9NQV6 1147 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 SNED1Q8TER0 1413 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 TMEM232C9JQI7 657 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 ALDH1B1P30837 517 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 FMR1Q06787 632 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 POSTNQ15063 836 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 DGKHQ86XP1 1220 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 BLIDQ8IZY5 108 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 ADAMTSL1Q8N6G6 1762 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 KLRG2A4D1S0 409 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 PARP1P09874 1014 aaKnown RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 GRM4Q14833 912 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 LETM2Q2VYF4 491 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 TBC1D22AQ8WUA7 517 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 TNFRSF25Q93038 417 aa14.36□□□□□ -0.11
LIMK1-201ENST00000336180 C16orf45Q96MC5 204 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 NUP88Q99567 741 aaPredicted RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
LIMK1-201ENST00000336180 CCDC88AQ3V6T2 1871 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 NCAPHQ15003 741 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 KARSQ15046 597 aaKnown RBP14.35□□□□□ -0.11
LIMK1-201ENST00000336180 MYH6P13533 1939 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
LIMK1-201ENST00000336180 OFD1O75665 1012 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 C15orf52Q6ZUT6 534 aaKnown RBP14.35□□□□□ -0.11
LIMK1-201ENST00000336180 TEKT1Q969V4 418 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 NAT10Q9H0A0 1025 aaKnown RBP14.35□□□□□ -0.11
LIMK1-201ENST00000336180 TMEM51Q9NW97 253 aa14.35□□□□□ -0.11
LIMK1-201ENST00000336180 USP27XA6NNY8 438 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 SLC15A2Q16348 729 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-201ENST00000336180 NID2Q14112 1375 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 SERPINC1P01008 464 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 UBE2SQ16763 222 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 ZNF592Q92610 1267 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 GAKO14976 1311 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 PPIP5K2O43314 1243 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
LIMK1-201ENST00000336180 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
LIMK1-201ENST00000336180 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 NEDD1Q8NHV4 660 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 SERPINB13Q9UIV8 391 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 PCDHA6Q9UN73 950 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 PCDHA8Q9Y5H6 950 aa14.34□□□□□ -0.11
LIMK1-201ENST00000336180 KIAA1551Q9HCM1 1747 aa14.33□□□□□ -0.11
LIMK1-201ENST00000336180 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
LIMK1-201ENST00000336180 GOLGA6L6A8MZA4 724 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms