RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ARHGAP6O43182 974 aa16.83■□□□□ 0.29
UBA1-201ENST00000335972 CYTH3O43739 400 aa16.83■□□□□ 0.29
UBA1-201ENST00000335972 BLIDQ8IZY5 108 aa16.83■□□□□ 0.29
UBA1-201ENST00000335972 ZNF397Q8NF99 534 aaPredicted RBP16.83■□□□□ 0.29
UBA1-201ENST00000335972 FERMT2Q96AC1 680 aa16.83■□□□□ 0.29
UBA1-201ENST00000335972 ZNF446Q9NWS9 450 aa16.83■□□□□ 0.29
UBA1-201ENST00000335972 RNF225M0QZC1 329 aaPredicted RBP16.83■□□□□ 0.28
UBA1-201ENST00000335972 KIF2AO00139 706 aaPredicted RBP16.83■□□□□ 0.28
UBA1-201ENST00000335972 CASP14P31944 242 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 SPATA1Q5VX52 437 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 APTXQ7Z2E3 356 aaKnown RBP16.83■□□□□ 0.28
UBA1-201ENST00000335972 SH3RF1Q7Z6J0 888 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 F8W031 263 aaPredicted RBP16.83■□□□□ 0.28
UBA1-201ENST00000335972 ABL1P00519 1130 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 PPP2R5BQ15173 497 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 CCDC93Q567U6 631 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 RAD9BQ6WBX8 426 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 GPIHBP1Q8IV16 184 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 L2HGDHQ9H9P8 463 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 KCND1Q9NSA2 647 aa16.83■□□□□ 0.28
UBA1-201ENST00000335972 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
UBA1-201ENST00000335972 WWC2Q6AWC2 1192 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
UBA1-201ENST00000335972 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 SLURP2P0DP57 97 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 USP17L2Q6R6M4 530 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 SMAP1Q8IYB5 467 aaPredicted RBP16.82■□□□□ 0.28
UBA1-201ENST00000335972 IQUBQ8NA54 791 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 A0A1B0GTH6 734 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 CCDC194A0A1B0GVG4 234 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 AKR1B15C9JRZ8 316 aaPredicted RBP16.82■□□□□ 0.28
UBA1-201ENST00000335972 FXR1P51114 621 aaKnown RBP eCLIP16.82■□□□□ 0.288e-6■□□□□ 9.5
UBA1-201ENST00000335972 TRIML1Q8N9V2 468 aa16.82■□□□□ 0.28
UBA1-201ENST00000335972 DDX41Q9UJV9 622 aaKnown RBP16.82■□□□□ 0.28
UBA1-201ENST00000335972 N4BP3O15049 544 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 SEC31AO94979 1220 aaKnown RBP16.81■□□□□ 0.28
UBA1-201ENST00000335972 SYCP1Q15431 976 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 E2F4Q16254 413 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 SEMA3EO15041 775 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 ZSCAN12O43309 604 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 UFL1O94874 794 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 ERCC5P28715 1186 aaPredicted RBP16.81■□□□□ 0.28
UBA1-201ENST00000335972 KIF5BP33176 963 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 STAT6P42226 847 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 GPSM2P81274 684 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 CASQ1P31415 396 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 TEX35Q5T0J7 233 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 ACRBPQ8NEB7 543 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 NELFBQ8WX92 580 aa16.81■□□□□ 0.28
UBA1-201ENST00000335972 KRT31Q15323 416 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 UBXN4Q92575 508 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 CCDC34Q96HJ3 373 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 OGFRQ9NZT2 677 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
UBA1-201ENST00000335972 BTDP43251 543 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 CLCN6P51797 869 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 TRAPPC3LQ5T215 181 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
UBA1-201ENST00000335972 A0A1B0GUL6 1792 aa16.8■□□□□ 0.28
UBA1-201ENST00000335972 PICALMQ13492 652 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 PRCPP42785 496 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
UBA1-201ENST00000335972 LETM2Q2VYF4 491 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 PCDHA6Q9UN73 950 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 TFR2Q9UP52 801 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 PCDHA8Q9Y5H6 950 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
UBA1-201ENST00000335972 RIMBP2O15034 1052 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 STX10O60499 249 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 RPN1P04843 607 aaKnown RBP16.79■□□□□ 0.28
UBA1-201ENST00000335972 ERCC3P19447 782 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 ELOA2Q8IYF1 753 aaPredicted RBP16.79■□□□□ 0.28
UBA1-201ENST00000335972 HPS3Q969F9 1004 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
UBA1-201ENST00000335972 FRMPD2Q68DX3 1309 aaPredicted RBP16.79■□□□□ 0.28
UBA1-201ENST00000335972 SBK1Q52WX2 424 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
UBA1-201ENST00000335972 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 GYPCP04921 128 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 CDKAL1Q5VV42 579 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 SPTY2D1Q68D10 685 aaPredicted RBP16.78■□□□□ 0.28
UBA1-201ENST00000335972 C4orf32Q8N8J7 132 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
UBA1-201ENST00000335972 USP21Q9UK80 565 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 RASA1P20936 1047 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 KCNJ6P48051 423 aa16.78■□□□□ 0.28
UBA1-201ENST00000335972 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms