RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 BRF1Q92994 677 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 GMCL1Q96IK5 515 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 PDHBP11177 359 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 BMP3P12645 472 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 OSBPP22059 807 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 TOB2Q14106 344 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 SGMS1Q86VZ5 419 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 MYL10Q9BUA6 226 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 SLC45A1Q9Y2W3 748 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
APOBEC3B-202ENST00000335760 FRMPD2Q68DX3 1309 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 HOXA7P31268 230 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 RABEP1Q15276 862 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 KCTD1Q719H9 257 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 NUP133Q8WUM0 1156 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 ALDH8A1Q9H2A2 487 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3B-202ENST00000335760 DDAH1O94760 285 aa16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 AK2P54819 239 aa16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 TROAPQ12815 778 aa16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 APOA5Q6Q788 366 aa16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 LARP6Q9BRS8 491 aaKnown RBP16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
APOBEC3B-202ENST00000335760 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 ZBTB43O43298 467 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 FLOT1O75955 427 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 ALDH1A1P00352 501 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 CALM1P0DP23 149 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 CALM2P0DP24 149 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 CALM3P0DP25 149 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 CYP2C8P10632 490 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 RXRAP19793 462 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 MAP2K1Q02750 393 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 ZNF543Q08ER8 600 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 IKQ13123 557 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 GRM4Q14833 912 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 ANKRD1Q15327 319 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 MICU3Q86XE3 530 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 CCDC144CPQ8IYA2 1237 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 FBXO28Q9NVF7 368 aa16.44■□□□□ 0.22
APOBEC3B-202ENST00000335760 COG2Q14746 738 aa16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 ASPRV1Q53RT3 343 aa16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 GPATCH4Q5T3I0 446 aaKnown RBP16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 TTBK2Q6IQ55 1244 aa16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 PARK7Q99497 189 aaKnown RBP16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 MAP3K14Q99558 947 aa16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 P2RX7Q99572 595 aaKnown RBP16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 RNF186Q9NXI6 227 aa16.43■□□□□ 0.22
APOBEC3B-202ENST00000335760 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 TRPA1O75762 1119 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 STAT2P52630 851 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 FAM160B2Q86V87 743 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 HOXC10Q9NYD6 342 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
APOBEC3B-202ENST00000335760 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 CA12O43570 354 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 DSG3P32926 999 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 SLC16A2P36021 539 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 EVCP57679 992 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 HERVK_113P62684 666 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 CRHR2Q13324 411 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 SMCR8Q8TEV9 937 aaPredicted RBP16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
APOBEC3B-202ENST00000335760 RLFQ13129 1914 aa16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 SPDYE16A6NNV3 312 aaPredicted RBP16.4■□□□□ 0.22
APOBEC3B-202ENST00000335760 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms