RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 RNF19BQ6ZMZ0 732 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 RBM43Q6ZSC3 357 aaKnown RBP10.08□□□□□ -0.8
LSAMP-201ENST00000333617 TRIM67Q6ZTA4 783 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 CATIPQ7Z7H3 387 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 COL23A1Q86Y22 540 aaPredicted RBP10.08□□□□□ -0.8
LSAMP-201ENST00000333617 CERS3Q8IU89 383 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 MCM9Q9NXL9 1143 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 MROH7-TTC4A0A0A0MT08 1334 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 ZMYND10O75800 440 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 DEXIO95424 95 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CALM1P0DP23 149 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CALM2P0DP24 149 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CALM3P0DP25 149 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CYP2D6P10635 497 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 NT5C2P49902 561 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 PRR20EP86478 221 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 PRR20CP86479 221 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 PRR20DP86480 221 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 PRR20BP86481 221 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 PRR20AP86496 221 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 TYRO3Q06418 890 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 GRIK5Q16478 980 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 ANO1Q5XXA6 986 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 NBPF11Q86T75 865 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CKAP2LQ8IYA6 745 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
LSAMP-201ENST00000333617 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
LSAMP-201ENST00000333617 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
LSAMP-201ENST00000333617 POLLQ9UGP5 575 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 PCDHA7Q9UN72 937 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 FCF1Q9Y324 198 aaKnown RBP10.07□□□□□ -0.8
LSAMP-201ENST00000333617 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 SLX4Q8IY92 1834 aa10.07□□□□□ -0.8
LSAMP-201ENST00000333617 A0A1W2PQ27 194 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 A0A1W2PQ64 194 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 A0A1W2PQD8 194 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 SPTLC2O15270 562 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 CTAGE5O15320 804 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 NPR1P16066 1061 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 U2AF2P26368 475 aaKnown RBP eCLIP10.06□□□□□ -0.8
LSAMP-201ENST00000333617 RXRBP28702 533 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 RPIAP49247 311 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 FAM160A1Q05DH4 1040 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 SAFBQ15424 915 aaKnown RBP eCLIP10.06□□□□□ -0.8
LSAMP-201ENST00000333617 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 ADALQ6DHV7 355 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 FSIP1Q8NA03 581 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 TBC1D22AQ8WUA7 517 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.06□□□□□ -0.8
LSAMP-201ENST00000333617 RNF26Q9BY78 433 aaPredicted RBP10.06□□□□□ -0.8
LSAMP-201ENST00000333617 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 RBM28Q9NW13 759 aaKnown RBP10.06□□□□□ -0.8
LSAMP-201ENST00000333617 MKRN1Q9UHC7 482 aaKnown RBP10.06□□□□□ -0.8
LSAMP-201ENST00000333617 ATP6V0A2Q9Y487 856 aa10.06□□□□□ -0.8
LSAMP-201ENST00000333617 TSPY2A6NKD2 308 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 ESPNB1AK53 854 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 DDAH1O94760 285 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 USP17L8P0C7I0 530 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 SRGNP10124 158 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 GUCY1A2P33402 732 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 PDE6BP35913 854 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 HS1BP3Q53T59 392 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 SASS6Q6UVJ0 657 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 RRAGDQ9NQL2 400 aaPredicted RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 ADAMTSL1Q8N6G6 1762 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 ROBO3Q96MS0 1386 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 SCN9AQ15858 1988 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 FAM205AQ6ZU69 1335 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 GPR75-ASB3A0A0A6YYF3 556 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 UBE2Q2LH0YL09 131 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 HOXA2O43364 376 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 MMP1P03956 469 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 MMP10P09238 476 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 ALDH1B1P30837 517 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 BTDP43251 543 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 SLC39A14Q15043 492 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 FAM47AQ5JRC9 791 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 MFSD14BQ5SR56 506 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 TGFBRAP1Q8WUH2 860 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 RTFDC1Q9BY42 306 aaPredicted RBP10.05□□□□□ -0.8
LSAMP-201ENST00000333617 MRVI1Q9Y6F6 885 aa10.05□□□□□ -0.8
LSAMP-201ENST00000333617 PSME4Q14997 1843 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 NMT2O60551 498 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms